SHOGoiN Cell Transcriptome: GSM1977419

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977419


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8020000000000000000000-709Sequence Read ArchiveSRP067661SRP067661_T21Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeMEP++ CFU-EM (megakaryocyte-erythroid progenitor, MEP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 125.2483
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 103.8572
3 ENSG00000075624 ACTB actin beta 59.8511
4 ENSG00000100316 RPL3 ribosomal protein L3 45.8686
5 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 45.1002
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 44.4434
7 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 44.2286
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 38.0395
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.7492
10 ENSG00000137154 RPS6 ribosomal protein S6 27.5445

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285989 TEC -0.0821
58734 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0821
58733 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0821
58732 ENSG00000285982 novel protein -0.0821
58731 ENSG00000285975 Putative protein FAM90A7P -0.0821
58730 ENSG00000285968 novel transcript -0.0821
58729 ENSG00000285963 novel transcript -0.0821
58728 ENSG00000285960 novel transcript -0.0821
58727 ENSG00000285959 novel transcript -0.0821
58726 ENSG00000285956 NA -0.0821

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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