SHOGoiN Cell Transcriptome: GSM1977419

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977419


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8020000000000000000000-709Sequence Read ArchiveSRP067661SRP067661_T21Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeMEP++ CFU-EM (megakaryocyte-erythroid progenitor, MEP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 133.0479
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 103.1389
3 ENSG00000075624 ACTB actin beta 48.7456
4 ENSG00000100316 RPL3 ribosomal protein L3 48.3717
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 46.0924
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 45.4720
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 42.0138
8 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 37.2992
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 30.7668
10 ENSG00000089157 RPLP0 ribosomal protein lateral stalk subunit P0 27.8256

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57057 ENSG00000270242 ACTR3BP1 ACTR3B pseudogene 1 -0.0818
57056 ENSG00000270241 ferritin, heavy polypeptide 1 (FTH1) pseudogene -0.0818
57055 ENSG00000270234 oocyte expressed protein (OOEP) pseudogene -0.0818
57054 ENSG00000270232 MTCYBP22 MT-CYB pseudogene 22 -0.0818
57053 ENSG00000270226 interleukin 9 receptor (IL9R) pseudogene -0.0818
57052 ENSG00000270212 novel transcript -0.0818
57051 ENSG00000270209 zinc finger protein 280 pseudogene -0.0818
57050 ENSG00000270204 phospholipase A2, group XIIA, pseudogene -0.0818
57049 ENSG00000270196 general transcription factor IIIC, polypeptide 6, alpha 35kDa, pseudogene -0.0818
57048 ENSG00000270193 cAMP responsive element binding protein 1 (CREB1) pseudogene -0.0818

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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