SHOGoiN Cell Transcriptome: GSM1977419

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1977419


Profile download
8020000000000000000000-709Sequence Read ArchiveSRP067661SRP067661_T21Distinct routes of lineage development reshape the human blood hierarchy across ontogenyTranscriptomeMEP++ CFU-EM (megakaryocyte-erythroid progenitor, MEP) (Cord blood)HumanEmbryonic bloodRNA-Seq, SMARTseqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 153.4293
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 72.3883
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 54.1196
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 53.9862
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 50.7013
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 43.3164
7 ENSG00000075624 ACTB actin beta 38.6627
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.3826
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.6666
10 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 28.4082

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000267223 NA -0.0960
57170 ENSG00000267212 NA -0.0960
57169 ENSG00000267206 LCN6 lipocalin 6 -0.0960
57168 ENSG00000267202 NA -0.0960
57167 ENSG00000267200 MIR132 microRNA 132 -0.0960
57166 ENSG00000267196 NA -0.0960
57165 ENSG00000267195 MIR212 microRNA 212 -0.0960
57164 ENSG00000267192 NA -0.0960
57163 ENSG00000267188 NA -0.0960
57162 ENSG00000267182 SNRPCP20 small nuclear ribonucleoprotein polypeptide C pseudogene 20 -0.0960

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...