SHOGoiN Cell Transcriptome: GSM1987574

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1987574


Profile download
3120102010200000000000-082Sequence Read ArchiveSRP067892SRP067892_T4Single-cell RNA-seq reveals distinct maturation stages of the Paneth cell lineageTranscriptomeLgr5-positive intestinal cell (CBC cell)MouseSmall intestineRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000097554 Gm26825 predicted gene, 26825 143.3644
2 ENSMUSG00000058174 Gm5148 predicted gene 5148 108.5193
3 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 66.5638
4 ENSMUSG00000030126 Tmcc1 transmembrane and coiled coil domains 1 40.7418
5 ENSMUSG00000075014 Gm10800 predicted gene 10800 40.3676
6 ENSMUSG00000006649 Nphs1 nephrosis 1, nephrin 40.2428
7 ENSMUSG00000034377 Tulp4 tubby like protein 4 38.9538
8 ENSMUSG00000049521 Cdc42ep1 CDC42 effector protein (Rho GTPase binding) 1 31.1781
9 ENSMUSG00000056880 Gadl1 glutamate decarboxylase-like 1 22.5292
10 ENSMUSG00000097445 Gm26631 predicted gene, 26631 22.4460

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117332 TEC -0.0494
54523 ENSMUSG00000117331 exocrine gland-secreting peptide pseudogene -0.0494
54522 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.0494
54521 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0494
54520 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0494
54519 ENSMUSG00000117327 NA -0.0494
54518 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0494
54517 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0494
54516 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0494
54515 ENSMUSG00000117323 novel transcript -0.0494

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...