SHOGoiN Cell Transcriptome: GSM2041917

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2041917


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6000001010000000000000Sequence Read ArchiveSRP068586SRP068586_T2Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeBone marrow cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 153.7377
2 ENSMUSG00000106106 NA 106.5950
3 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 71.6064
4 ENSMUSG00000095280 Gm21738 predicted gene, 21738 35.2128
6 ENSMUSG00000058174 Gm5148 predicted gene 5148 31.6945
8 ENSMUSG00000085715 Tsix X (inactive)-specific transcript, opposite strand 13.6005
9 ENSMUSG00000012126 Ubxn11 UBX domain protein 11 12.4582
10 ENSMUSG00000106440 Gm44466 predicted gene, 44466 12.4011
46615 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0386
46616 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.0386

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.0386
46623 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.0386
46622 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0386
46621 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.0386
46620 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.0386
46619 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.0386
46618 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.0386
46617 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.0386
46616 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.0386
46615 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0386

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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