SHOGoiN Cell Transcriptome: GSM2041929

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2041929


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6000001010000000000000Sequence Read ArchiveSRP068586SRP068586_T14Single-cell RNA-seq of sorted and micro-dissected mouse bone marrow cellsTranscriptomeBone marrow cellMouseBone marrowRNA-SeqNextSeq 500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 209.1842
2 ENSMUSG00000095280 Gm21738 predicted gene, 21738 41.4616
3 ENSMUSG00000015484 Fam163a family with sequence similarity 163, member A 18.9342
4 ENSMUSG00000106106 Rn18s-rs5 18s RNA, related sequence 5 15.2714
5 ENSMUSG00000106864 Gtf3c2 general transcription factor IIIC, polypeptide 2, beta 9.8800
6 ENSMUSG00000075015 Gm10801 predicted gene 10801 9.8714
7 ENSMUSG00000031953 Tmem170 transmembrane protein 170 9.8243
8 ENSMUSG00000027306 Nusap1 nucleolar and spindle associated protein 1 8.5841
9 ENSMUSG00000020520 Galnt10 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 7.1233
10 ENSMUSG00000095891 Gm10717 predicted gene 10717 7.0312

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46966 ENSMUSG00000108668 NA -0.0203
46965 ENSMUSG00000108667 NA -0.0203
46964 ENSMUSG00000108666 NA -0.0203
46963 ENSMUSG00000108663 NA -0.0203
46962 ENSMUSG00000108661 NA -0.0203
46961 ENSMUSG00000108658 NA -0.0203
46960 ENSMUSG00000108657 NA -0.0203
46959 ENSMUSG00000108654 NA -0.0203
46957 ENSMUSG00000108652 NA -0.0203
10 ENSMUSG00000095891 Gm10717 predicted gene 10717 7.0312

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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