SHOGoiN Cell Transcriptome: GSM2871128

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2871128


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7020001000000000000000-715Sequence Read ArchiveSRP125954SRP125954_T4Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencingTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210151 MT-TS1 mitochondrially encoded tRNA serine 1 (UCN) 182.9826
2 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 108.8739
3 ENSG00000265401 NA 63.1258
4 ENSG00000269968 NA 47.2139
5 ENSG00000258017 NA 38.7835
6 ENSG00000174720 LARP7 La ribonucleoprotein domain family member 7 36.8243
7 ENSG00000132763 MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria 26.1397
8 ENSG00000210196 MT-TP mitochondrially encoded tRNA proline 19.4921
10 ENSG00000235552 RPL6P27 ribosomal protein L6 pseudogene 27 18.5210
57163 ENSG00000275743 TRBV14 T cell receptor beta variable 14 -0.0338

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000275763 C18orf65 chromosome 18 open reading frame 65 -0.0338
57169 ENSG00000275759 NA -0.0338
57168 ENSG00000275756 NA -0.0338
57165 ENSG00000275747 IGHV3-79 immunoglobulin heavy variable 3-79 (pseudogene) -0.0338
57164 ENSG00000275745 NA -0.0338
57163 ENSG00000275743 TRBV14 T cell receptor beta variable 14 -0.0338
10 ENSG00000235552 RPL6P27 ribosomal protein L6 pseudogene 27 18.5210
8 ENSG00000210196 MT-TP mitochondrially encoded tRNA proline 19.4921
7 ENSG00000132763 MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria 26.1397
6 ENSG00000174720 LARP7 La ribonucleoprotein domain family member 7 36.8243

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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