SHOGoiN Cell Transcriptome: GSM2871129

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2871129


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7020001000000000000000-715Sequence Read ArchiveSRP125954SRP125954_T5Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencingTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210151 MT-TS1 mitochondrially encoded tRNA serine 1 (UCN) 173.5736
2 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 95.2431
3 ENSG00000265401 NA 85.2434
4 ENSG00000269968 NA 60.8404
5 ENSG00000258017 NA 52.7887
6 ENSG00000132763 MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria 39.9130
7 ENSG00000152348 ATG10 autophagy related 10 25.9535
8 ENSG00000210196 MT-TP mitochondrially encoded tRNA proline 18.1846
9 ENSG00000143882 ATP6V1C2 ATPase H+ transporting V1 subunit C2 16.4432
10 ENSG00000167995 BEST1 bestrophin 1 14.7445

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000275286 NA -0.0357
57170 ENSG00000275285 NA -0.0357
57169 ENSG00000275280 NA -0.0357
57167 ENSG00000275278 NA -0.0357
57165 ENSG00000275273 MIR6780A microRNA 6780a -0.0357
57163 ENSG00000275268 NA -0.0357
10 ENSG00000167995 BEST1 bestrophin 1 14.7445
9 ENSG00000143882 ATP6V1C2 ATPase H+ transporting V1 subunit C2 16.4432
8 ENSG00000210196 MT-TP mitochondrially encoded tRNA proline 18.1846
7 ENSG00000152348 ATG10 autophagy related 10 25.9535

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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