SHOGoiN Cell Transcriptome: GSM3015987

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM3015987


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7020001000000000000000-715Sequence Read ArchiveSRP125954SRP125954_T8Mapping human pluripotent stem cell differentiation pathways via high throughput single-cell RNA-sequencingTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210151 MT-TS1 mitochondrially encoded tRNA serine 1 (UCN) 151.6929
2 ENSG00000265401 NA 101.5168
3 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 82.5025
4 ENSG00000269968 NA 82.3833
5 ENSG00000258017 NA 48.1147
6 ENSG00000235552 RPL6P27 ribosomal protein L6 pseudogene 27 33.4535
7 ENSG00000132763 MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria 33.1255
8 ENSG00000167995 BEST1 bestrophin 1 24.9548
9 ENSG00000225339 NA 22.6644
57164 ENSG00000276039 NA -0.0407

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276055 NA -0.0407
57170 ENSG00000276054 NA -0.0407
57169 ENSG00000276050 IGKV2OR2-10 immunoglobulin kappa variable 2/OR2-10 (pseudogene) -0.0407
57168 ENSG00000276048 NA -0.0407
57167 ENSG00000276047 RN7SL711P RNA, 7SL, cytoplasmic 711, pseudogene -0.0407
57166 ENSG00000276046 DUX4L13 double homeobox 4 like 13 -0.0407
57165 ENSG00000276040 SPATA31A7 SPATA31 subfamily A member 7 -0.0407
57164 ENSG00000276039 NA -0.0407
9 ENSG00000225339 NA 22.6644
8 ENSG00000167995 BEST1 bestrophin 1 24.9548

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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