SHOGoiN Cell Transcriptome: GSM967488

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967488


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5030206000000000000000-761Sequence Read ArchiveSRP014428SRP014428_T12Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeSecondary oocyte (Ovarian follicle)MouseGenitaliaRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 76.3937
2 ENSMUSG00000042279 H1foo H1 histone family, member O, oocyte-specific 65.2587
3 ENSMUSG00000045291 E330021D16Rik RIKEN cDNA E330021D16 gene 50.5085
4 ENSMUSG00000041359 Tcl1 T cell lymphoma breakpoint 1 40.6852
5 ENSMUSG00000032191 Bcl2l10 Bcl2-like 10 39.7396
6 ENSMUSG00000032056 Btg4 B cell translocation gene 4 37.0715
7 ENSMUSG00000021395 Spin1 spindlin 1 34.4993
8 ENSMUSG00000050810 Oog3 oogenesin 3 31.7955
9 ENSMUSG00000041995 Zbed3 zinc finger, BED type containing 3 30.4513
10 ENSMUSG00000018238 Gdf9 growth differentiation factor 9 30.0438

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108221 Gm44203 predicted gene, 44203 -0.1474
46623 ENSMUSG00000108220 Gm44056 predicted gene, 44056 -0.1474
46622 ENSMUSG00000108218 Olfr1372-ps1 olfactory receptor 1372, pseudogene 1 -0.1474
46621 ENSMUSG00000108217 Gm43883 predicted gene, 43883 -0.1474
46620 ENSMUSG00000108216 Gm44153 predicted gene, 44153 -0.1474
46619 ENSMUSG00000108215 Gm8083 predicted gene 8083 -0.1474
46618 ENSMUSG00000108214 Gm43982 predicted gene, 43982 -0.1474
46617 ENSMUSG00000108213 Gm44172 predicted gene, 44172 -0.1474
46616 ENSMUSG00000108212 Gm44132 predicted gene, 44132 -0.1474
46615 ENSMUSG00000108211 Gm44130 predicted gene, 44130 -0.1474

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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