SHOGoiN Cell Transcriptome: GSM967489

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967489


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5030206000000000000000-761Sequence Read ArchiveSRP014428SRP014428_T13Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeSecondary oocyte (Ovarian follicle)MouseGenitaliaRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000042279 H1foo H1 histone family, member O, oocyte-specific 64.6826
2 ENSMUSG00000045291 E330021D16Rik RIKEN cDNA E330021D16 gene 60.1232
3 ENSMUSG00000098178 Gm42418 predicted gene, 42418 54.0136
4 ENSMUSG00000032056 Btg4 B cell translocation gene 4 47.0440
5 ENSMUSG00000041359 Tcl1 T cell lymphoma breakpoint 1 43.8190
6 ENSMUSG00000032191 Bcl2l10 Bcl2-like 10 41.3527
7 ENSMUSG00000018238 Gdf9 growth differentiation factor 9 40.1611
8 ENSMUSG00000050810 Oog3 oogenesin 3 32.4243
9 ENSMUSG00000021395 Spin1 spindlin 1 31.9169
10 ENSMUSG00000032623 Oas1d 2'-5' oligoadenylate synthetase 1D 29.0859

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.1390
54523 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.1390
54522 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.1390
54521 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.1390
54520 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.1390
54519 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.1390
54518 ENSMUSG00000117323 novel transcript -0.1390
54517 ENSMUSG00000117322 novel transcript, antisense to Zfp213 -0.1390
54516 ENSMUSG00000117321 ribosomal protein S27 (Rps27) pseudogene -0.1390
54515 ENSMUSG00000117320 ribosomal protein S6 (Rps6) pseudogene -0.1390

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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