SHOGoiN Cell Transcriptome: GSM967508

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967508


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T1Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 107.5841
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 105.0493
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 70.2050
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 67.5573
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 51.5760
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 50.3749
7 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 39.6277
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 38.1336
9 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 36.2844
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 28.3864

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276718 NA -0.0942
57170 ENSG00000276717 NA -0.0942
57169 ENSG00000276715 YWHAEP7 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 7 -0.0942
57168 ENSG00000276713 NA -0.0942
57167 ENSG00000276712 MIR7111 microRNA 7111 -0.0942
57166 ENSG00000276711 NA -0.0942
57165 ENSG00000276710 CSPG4P10 chondroitin sulfate proteoglycan 4 pseudogene 10 -0.0942
57164 ENSG00000276707 NA -0.0942
57163 ENSG00000276706 NA -0.0942
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 28.3864

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...