SHOGoiN Cell Transcriptome: GSM967509

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967509


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T2Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 108.0072
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.4911
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 78.2141
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 62.8278
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 62.3592
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 45.1648
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 39.7553
8 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 32.2513
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 31.5327
10 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 30.3114

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276670 NA -0.1095
57170 ENSG00000276669 NA -0.1095
57169 ENSG00000276668 NA -0.1095
57167 ENSG00000276664 NA -0.1095
57166 ENSG00000276663 NA -0.1095
57165 ENSG00000276662 NA -0.1095
57162 ENSG00000276656 MIR6083 microRNA 6083 -0.1095
10 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 30.3114
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 31.5327
8 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 32.2513

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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