SHOGoiN Cell Transcriptome: GSM967511

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967511


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T4Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 101.4968
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 90.3991
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 78.0413
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 62.7917
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 49.3572
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 48.1676
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 39.2358
8 ENSG00000075624 ACTB actin beta 37.5849
9 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 37.2247
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 35.0381

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276768 NA -0.1067
57170 ENSG00000276765 MIR8073 microRNA 8073 -0.1067
57169 ENSG00000276764 NA -0.1067
57168 ENSG00000276763 NA -0.1067
57166 ENSG00000276760 POTE ankyrin domain family member B-like -0.1067
57165 ENSG00000276759 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -0.1067
57164 ENSG00000276758 NA -0.1067
57163 ENSG00000276757 RN7SL192P RNA, 7SL, cytoplasmic 192, pseudogene -0.1067
57162 ENSG00000276756 NA -0.1067
10 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 35.0381

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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