SHOGoiN Cell Transcriptome: GSM967512

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967512


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T5Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 90.1960
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 74.3517
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 71.2513
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 71.1697
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 59.6676
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 52.9275
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 49.1459
8 ENSG00000075624 ACTB actin beta 40.4213
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 33.2483
10 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 32.9391

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276704 NA -0.1097
57169 ENSG00000276703 RPS29P32 ribosomal protein S29 pseudogene 32 -0.1097
57168 ENSG00000276702 NA -0.1097
57167 ENSG00000276699 TRAJ36 T cell receptor alpha joining 36 -0.1097
57166 ENSG00000276698 NA -0.1097
57165 ENSG00000276696 NA -0.1097
57162 ENSG00000276693 NA -0.1097
10 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 32.9391
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 33.2483
8 ENSG00000075624 ACTB actin beta 40.4213

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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