SHOGoiN Cell Transcriptome: GSM967513

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967513


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T6Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 111.5266
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 94.0301
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 63.1433
4 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 62.1318
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 44.2020
6 ENSG00000075624 ACTB actin beta 41.1560
7 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 35.9949
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 29.9327
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 29.9242
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.2642

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276724 NA -0.1145
57170 ENSG00000276723 NA -0.1145
57169 ENSG00000276722 NA -0.1145
57168 ENSG00000276721 NA -0.1145
57167 ENSG00000276718 NA -0.1145
57166 ENSG00000276717 NA -0.1145
57165 ENSG00000276715 YWHAEP7 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 7 -0.1145
57164 ENSG00000276713 NA -0.1145
57163 ENSG00000276712 MIR7111 microRNA 7111 -0.1145
57162 ENSG00000276711 NA -0.1145

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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