SHOGoiN Cell Transcriptome: GSM967514

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967514


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T7Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 109.2003
2 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 73.9728
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 67.8330
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 62.6648
5 ENSG00000075624 ACTB actin beta 54.0227
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 46.8521
7 ENSG00000087086 FTL ferritin light chain 42.7293
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.4479
9 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 39.0271
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 34.9593

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276706 NA -0.1107
57169 ENSG00000276704 NA -0.1107
57168 ENSG00000276703 RPS29P32 ribosomal protein S29 pseudogene 32 -0.1107
57167 ENSG00000276702 NA -0.1107
57166 ENSG00000276699 TRAJ36 T cell receptor alpha joining 36 -0.1107
57165 ENSG00000276698 NA -0.1107
57164 ENSG00000276696 NA -0.1107
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 34.9593
9 ENSG00000237973 MTCO1P12 mitochondrially encoded cytochrome c oxidase I pseudogene 12 39.0271
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 41.4479

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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