SHOGoiN Cell Transcriptome: GSM967515

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM967515


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7020001000000000000000-715Sequence Read ArchiveSRP014428SRP014428_T8Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cellsTranscriptomeEmbryonic stem cell (Inner cell mass)HumanEarly embryonic tissueRNA-seqGenome Analyzer IIxSequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 108.5285
2 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 73.7891
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 70.0367
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 68.0216
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 46.3164
6 ENSG00000075624 ACTB actin beta 43.7280
7 ENSG00000184009 ACTG1 actin gamma 1 35.8177
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 33.2761
9 ENSG00000203396 NA 30.9928
10 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 29.8009

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000276733 MIR7158 microRNA 7158 -0.1182
57170 ENSG00000276730 NA -0.1182
57169 ENSG00000276729 NA -0.1182
57168 ENSG00000276728 NA -0.1182
57167 ENSG00000276727 NA -0.1182
57166 ENSG00000276724 NA -0.1182
57165 ENSG00000276723 NA -0.1182
57164 ENSG00000276722 NA -0.1182
57163 ENSG00000276721 NA -0.1182
57162 ENSG00000276718 NA -0.1182

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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