SHOGoiN Cell Transcriptome: SAMN02870136

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

SAMN02870136


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8010000000000000000000-001Sequence Read ArchiveSRP043513SRP043513_T1Single Cell RNAseq data and PacBio amplicon sequencing dataTranscriptomeB cell, IgM expressing HumanBloodRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000211673 IGLV3-1 immunoglobulin lambda variable 3-1 134.2152
2 ENSG00000211677 IGLC2 immunoglobulin lambda constant 2 133.4527
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 89.6476
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 80.4441
5 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 31.1873
6 ENSG00000132465 JCHAIN joining chain of multimeric IgA and IgM 28.3131
7 ENSG00000211895 IGHA1 immunoglobulin heavy constant alpha 1 23.8172
8 ENSG00000116489 CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 19.3170
9 ENSG00000211938 IGHV3-7 immunoglobulin heavy variable 3-7 16.0193
10 ENSG00000166710 B2M beta-2-microglobulin 15.2926

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277194 SNORD22 small nucleolar RNA, C/D box 22 -0.0427
57169 ENSG00000277191 NA -0.0427
57167 ENSG00000277188 NA -0.0427
57166 ENSG00000277186 NA -0.0427
57165 ENSG00000277184 SNORA9 small nucleolar RNA, H/ACA box 9 -0.0427
57164 ENSG00000277182 NA -0.0427
57162 ENSG00000277174 NA -0.0427
10 ENSG00000166710 B2M beta-2-microglobulin 15.2926
9 ENSG00000211938 IGHV3-7 immunoglobulin heavy variable 3-7 16.0193
8 ENSG00000116489 CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 19.3170

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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