SHOGoiN Cell Transcriptome: SAMN02870137

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

SAMN02870137


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8010000000000000000000-001Sequence Read ArchiveSRP043513SRP043513_T2Single Cell RNAseq data and PacBio amplicon sequencing dataTranscriptomeB cell, IgA expressing HumanBloodRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000132465 JCHAIN joining chain of multimeric IgA and IgM 151.8913
2 ENSG00000211677 IGLC2 immunoglobulin lambda constant 2 138.0421
3 ENSG00000211648 IGLV1-47 immunoglobulin lambda variable 1-47 108.6670
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 40.7175
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 40.6343
6 ENSG00000211899 IGHM immunoglobulin heavy constant mu 23.8952
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 20.6484
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 16.5216
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 12.2759
10 ENSG00000253655 IGJP1 immunoglobulin J polypeptide pseudogene 1 11.7883

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277211 NA -0.0272
57169 ENSG00000277210 NA -0.0272
57168 ENSG00000277209 RPPH1 ribonuclease P RNA component H1 -0.0272
57167 ENSG00000277208 NA -0.0272
57165 ENSG00000277206 NA -0.0272
57163 ENSG00000277203 F8A1 coagulation factor VIII associated 1 -0.0272
57162 ENSG00000277202 MIR8063 microRNA 8063 -0.0272
10 ENSG00000253655 IGJP1 immunoglobulin J polypeptide pseudogene 1 11.7883
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 12.2759
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 16.5216

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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