Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell ID: 3070000080500000000000-144
SHOGoiN Cell Taxonomy
Homo sapiens
&
Mus musculus
cell
Differentiated (1)
Stem (0)
Embryo (0)
No.
Germ Layer
Differentiation State
Source Age
Anatomy Id
Cell Type Id
Anatomy:body Part
Anatomy:organ
Anatomy:sub-organ
Anatomy:tissue 1
Anatomy:tissue 2
Anatomy:tissue 3
Anatomy:tissue 4
Anatomy:tissue 5-1
Anatomy:tissue 5-2
Anatomy:tissue 5-3
Anatomy:tissue 5-4
Cell Type
Synonym
CL Id
UBERON Id
Image Id
Tissue Image ID
1
3
Endodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
3070000080500000000000
144
Trunk
Liver
Hepatic lobule
Liver cell cord
Hepatocyte
CL:0000182
45
t071
SHOGoiN Cell Marker
Cell Type Name
Hepatocyte
Hepatocyte
Cell Type Subclass
SHOGoiN Cell Id
3070000080500000000000-144
3070000080500000000000-144
Anatomical Location
Liver
Liver
Marker Molecule:name
glucose-6-phosphatase
Keratin, type I cytoskeletal 18 (cytokeratin18)
Marker Molecule:type
Peptide hormone
Protein
Marker Molecule:category
Secreted
Subcellular Localization
Endprasmic reticulum
Cytosol
Uniprot Id
P35575
P05783
Gene Id
Source Organism
Human
Human
Reference
PMID:12077359
PMID:17432598
Image
SHOGoiN Cell Id
3070000080500000000000-144
Image Id
45
Tissue
Liver
Cell Type
Hepatocyte
Organism
Human
Cell Strain
Location
Liver
Karyotype
Race
Age
Sex
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease
Cod
Shooting Date
2008.1.5
Shooting Condition
Embedding
Paraffin
Staining
Hematoxylin
Microscope
OLYMPUS DX50
Camera
OLYMPUS DP20
Image Size X
1600
Image Size Y
1200
Resolution
72
Magnification
400
Contact Person
Koji Yamanegi
Email
yamanegi@hyo-med.ac.jp
Telephone
0798-45-6432
Fax
0798-45-6431
Affiliation
Department of clinical pathology, Hyogo collage of medicine
Zip Code
663-8501
Address
1-1, Mukogawa, Nishinomiya, Hyogo
Country
Japan
Note
Nucleous Area
1032.5
Nucleous Circularity
0.84
Nucleous Bending
1103
Nucleous Convex Area
183911
Nucleous Ellipse Long Axis
44.02
Nucleous Inertia
0.95
Cell Area
6698.5
Cell Circularity
0.55
Cell Bending
1.88
Cell Convex Area
7873
Cell Ellipse Long Axis
103.04
Cell Inertia
7.86E+06
Cell-nucleous Area Ratio
0.15
Cell-nucleous Eccentricity1
0.29
Cell-nucleous Eccentricity2
0.24
Cell-nucleous Eccentricity3
0.84
Cell-nucleous Eccentricity4
0.57