Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell ID: 3090000000000000000000
SHOGoiN Cell Taxonomy
Homo sapiens
&
Mus musculus
cell
Differentiated (1)
Stem (0)
Embryo (0)
No.
Germ Layer
Differentiation State
Source Age
Anatomy Id
Cell Type Id
Anatomy:body Part
Anatomy:organ
Anatomy:sub-organ
Anatomy:tissue 1
Anatomy:tissue 2
Anatomy:tissue 3
Anatomy:tissue 4
Anatomy:tissue 5-1
Anatomy:tissue 5-2
Anatomy:tissue 5-3
Anatomy:tissue 5-4
Cell Type
Synonym
CL Id
UBERON Id
Image Id
Tissue Image ID
1
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
3090000000000000000000
006
Trunk
Lymph node
Lymph node macrophage
CL:0000868
SHOGoiN Cell Marker
Cell Type Name
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Cell Type Subclass
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Immunoblast
Lymphoplasmacytoid cell
Lymphoplasmacytoid cell
Lymphoplasmacytoid cell
Lymphoplasmacytoid cell
Lymphoplasmacytoid cell
Lymphoplasmacytoid cell
Lymphoplasmacytoid cell
SHOGoiN Cell Id
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
3090000000000000000000
Anatomical Location
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Lymph node
Marker Molecule:name
Neprilysin (Common acute lymphocytic leukemia antigen, CD10, Atriopeptidase, Common acute lymphocytic leukemia antigen, CALLA, MME, EPN)
B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4, Differentiation antigen CD19, T-cell surface antigen Leu-12, CD19)
B-cell receptor CD22 (B-lymphocyte cell adhesion molecule, BL-CAM, Sialic acid-binding Ig-like lectin 2, Siglec-2, T-cell surface antigen Leu-14, CD22)
Leukocyte antigen CD37 (Tetraspanin-26, Tspan-26, CD37, TSPAN26)
Tumor necrosis factor receptor superfamily member 5 (B-cell surface antigen CD40, Bp50, CD40L receptor, CDw40, CD40, TNFRSF5)
B-cell differentiation antigen CD72 (Lyb-2, CD72)
B-lymphocyte antigen CD20 (B-lymphocyte surface antigen B1, Bp35, Leukocyte surface antigen Leu-16, Membrane-spanning 4-domains subfamily A member 1, MS4A1, CD20)
Signal transducer CD24 (Small cell lung carcinoma cluster 4 antigen, CD24, CD24A)
Ectonucleoside triphosphate diphosphohydrolase 1 ( NTPDase 1, Ecto-ATP diphosphohydrolase 1, Ecto-ATPase 1, Ecto-apyrase, Lymphoid cell activation antigen, CD39, ENTPD1)
HLA class II histocompatibility antigen gamma chain (HLA-DR antigens-associated invariant chain, Ia antigen-associated invariant chain, p33, CD74, DHLAG)
B-cell antigen receptor complex-associated protein alpha chain (Ig-alpha, MB-1 membrane glycoprotein, Membrane-bound immunoglobulin-associated protein, Surface IgM-associated protein, CD79a, IGA, MB1)
B-cell antigen receptor complex-associated protein beta chain (B-cell-specific glycoprotein B29, Ig-beta, Immunoglobulin-associated B29 protein, CD79b)
CD139
ICOS ligand (B7 homolog 2, B7-H2, B7-like protein Gl50, B7-related protein 1, B7RP-1, CD275, B7H2, B7RP1, ICOSL, KIAA0653)
Toll-like receptor 9 (CD289, TLR9)
Fc receptor-like protein 5 (FcR-like protein 5, BXMAS1, Immune receptor translocation-associated protein 2, CD307, CD307e, FCRL5, IRTA2)
Immunoglobulin superfamily member 8, IgSF8 (CD81 partner 3, EWI-2, Keratinocytes-associated transmembrane protein 4, KCT-4, LIR-D1, Prostaglandin regulatory-like protein, PGRL, CD316, IGSF8, CD81P3, E
Bone marrow stromal antigen 2 (CD317, BST-2, HM1.24 antigen, Tetherin, BST2)
B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4, Differentiation antigen CD19, T-cell surface antigen Leu-12, CD19)
B-cell antigen receptor complex-associated protein alpha chain (Ig-alpha, MB-1 membrane glycoprotein, Membrane-bound immunoglobulin-associated protein, Surface IgM-associated protein, CD79a, IGA, MB1)
B-cell antigen receptor complex-associated protein beta chain (B-cell-specific glycoprotein B29, Ig-beta, Immunoglobulin-associated B29 protein, CD79b)
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-cyclic-ADP-ribose transferase, ADP-ribosyl cyclase 1, ADPRC 1, cADPr hydrolase 1, T10, CD38)
ICOS ligand (B7 homolog 2, B7-H2, B7-like protein Gl50, B7-related protein 1, B7RP-1, CD275, B7H2, B7RP1, ICOSL, KIAA0653)
Immunoglobulin superfamily member 8, IgSF8 (CD81 partner 3, EWI-2, Keratinocytes-associated transmembrane protein 4, KCT-4, LIR-D1, Prostaglandin regulatory-like protein, PGRL, CD316, IGSF8, CD81P3, E
Bone marrow stromal antigen 2 (CD317, BST-2, HM1.24 antigen, Tetherin, BST2)
Marker Molecule:type
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Marker Molecule:category
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
Subcellular Localization
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane, Secreted
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane, Secreted
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Uniprot Id
P08473
P15391
P20273
P11049
P25942
P21854
P11836
P25063
P49961
P04233
P11912
P40259
O75144
Q96RD9
Q969P0
Q10589
P15391
P11912
P40259
P28907
O75144
Q969P0
Q10589
Gene Id
Source Organism
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Reference