Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell ID: 3120001000000000000000-764
SHOGoiN Cell Taxonomy
Homo sapiens
&
Mus musculus
cell
Differentiated (0)
Stem (1)
Embryo (0)
No.
Germ Layer
Differentiation State
Source Age
Anatomy Id
Cell Type Id
Anatomy:body Part
Anatomy:organ
Anatomy:sub-organ
Anatomy:tissue 1
Anatomy:tissue 2
Anatomy:tissue 3
Anatomy:tissue 4
Anatomy:tissue 5-1
Anatomy:tissue 5-2
Anatomy:tissue 5-3
Anatomy:tissue 5-4
Cell Type
Synonym
CL Id
UBERON Id
Image Id
Tissue Image ID
1
3
Endodermal
3
Multipotent/Progenitor/Precursor
5
Pharyngula state ~
3120001000000000000000
764
Trunk
Small intestine
Mucosa
Small intestinal stem cell
SHOGoiN Cell Marker
Cell Type Name
small intestinal stem cell
Small intestinal stem cell
Small intestinal stem cell
Small intestinal stem cell
Small intestinal stem cell
Small intestinal stem cell
Cell Type Subclass
SHOGoiN Cell Id
3120001000000000000000-764
3120001000000000000000-764
3120001000000000000000-764
3120001000000000000000-764
3120001000000000000000-764
3120001000000000000000-764
Anatomical Location
Small intestine
Small intestine
Small intestine
Small intestine
Small intestine
Small intestine
Marker Molecule:name
Leucine-rich repeat-containing G-protein coupled receptor 5 (GPR49, GPR67)
RNA-binding protein Musashi homolog 1 (MSI1)
Doublecortin- and Calmodulin Kinase-Like 1 (DCAMKL1)
Ephrin type-B receptor 2 (Eph2)
Integrin beta 1 (Fibronectin receptor subunit beta, Glycoprotein Iia, CD29
Leucine-rich repeat-containing G-protein coupled receptor 5 (GPR49, GPR67, LGR5)
Marker Molecule:type
Protein
Protein
Protein
Protein
Protein
Protein
Marker Molecule:category
Skeletal
CD molecule
Subcellular Localization
Plasma membrane
Nucleus
Cytosol
Plasma membrane
Plasma membrane
Plasma membrane
Uniprot Id
O75473
O43347
O15075
P29323
P05556
O75473
Gene Id
Source Organism
Human
Human
Human
Human
Human
Human
Reference
PMID:17934449
PMID: 18638070
PMID: 18638070
PMID: 18638070
PMID: 18638070
PMID: 18638070