Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell ID: 3160201000000000000000-062
SHOGoiN Cell Taxonomy
Homo sapiens
&
Mus musculus
cell
Differentiated (1)
Stem (0)
Embryo (0)
No.
Germ Layer
Differentiation State
Source Age
Anatomy Id
Cell Type Id
Anatomy:body Part
Anatomy:organ
Anatomy:sub-organ
Anatomy:tissue 1
Anatomy:tissue 2
Anatomy:tissue 3
Anatomy:tissue 4
Anatomy:tissue 5-1
Anatomy:tissue 5-2
Anatomy:tissue 5-3
Anatomy:tissue 5-4
Cell Type
Synonym
CL Id
UBERON Id
Image Id
Tissue Image ID
1
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
3160201000000000000000
062
Trunk
Thymus
Lobule of thymus
Cortex of thymus
Cortical thymocyte
t036
,
t037
SHOGoiN Cell Marker
Cell Type Name
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Cell Type Subclass
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
Cortical thymocyte
SHOGoiN Cell Id
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
3160201000000000000000-062
Anatomical Location
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Thymus
Marker Molecule:name
T-cell surface glycoprotein CD1a (T-cell surface antigen T6/Leu-6, hTa1 thymocyte antigen, CD1a)
T-cell surface glycoprotein CD1b (CD1B)
T-cell surface glycoprotein CD1c (CD1C)
T-cell antigen CD7 (GP40, T-cell leukemia antigen, T-cell surface antigen Leu-9, TP41, CD7)
T-cell surface antigen CD2 (Erythrocyte receptor, LFA-3 receptor, Rosette receptor, T-cell surface antigen T11/Leu-5, CD2, SRBC)
T-cell surface glycoprotein CD3 epsilon chain (T-cell surface antigen T3/Leu-4 epsilon chain, CD3e, T3E)
T-cell surface glycoprotein CD3 delta chain (T-cell receptor T3 delta chain, CD3d, T3D)
T-cell surface glycoprotein CD3 gamma chain (T-cell receptor T3 gamma chain, CD3g, T3G)
T-cell surface glycoprotein CD3 zeta chain (T-cell receptor T3 zeta chain, CD247, CD3Z, T3Z, TCRZ)
T-cell surface glycoprotein CD4 (T-cell surface antigen T4/Leu-3, CD4)
T-cell surface glycoprotein CD5 (Lymphocyte antigen T1/Leu-1, CD5, LEU1)
T-cell surface glycoprotein CD8 alpha chain (T-lymphocyte differentiation antigen T8/Leu-2, CD8a, CD8A, MAL)
T-cell surface glycoprotein CD8 beta chain (CD8b, CD8B1)
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-cyclic-ADP-ribose transferase, ADP-ribosyl cyclase 1, ADPRC 1, cADPr hydrolase 1, T10, CD38)
CAMPATH-1 antigen (CDw52, Cambridge pathology 1 antigen, Epididymal secretory protein E5, Human epididymis-specific protein 5, He5, CD52)
CD165 (CD165 antigen)
OX-2 membrane glycoprotein (CD200, MOX1, MOX2)
Marker Molecule:type
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Gene
Protein
Marker Molecule:category
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
Subcellular Localization
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane, Secreted
Plasma membrane, Secreted
Plasma membrane
Plasma membrane
Plasma membrane
Uniprot Id
P06126
P29016
P09564
P06729
P07766
P04234
P09693
P20963
P01730
P06127
P01732
P10966
P28907
P31358
P41217
Gene Id
23449
Source Organism
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Reference
