Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell ID: 3160202000000000000000-066
SHOGoiN Cell Taxonomy
Homo sapiens
&
Mus musculus
cell
Differentiated (1)
Stem (0)
Embryo (0)
No.
Germ Layer
Differentiation State
Source Age
Anatomy Id
Cell Type Id
Anatomy:body Part
Anatomy:organ
Anatomy:sub-organ
Anatomy:tissue 1
Anatomy:tissue 2
Anatomy:tissue 3
Anatomy:tissue 4
Anatomy:tissue 5-1
Anatomy:tissue 5-2
Anatomy:tissue 5-3
Anatomy:tissue 5-4
Cell Type
Synonym
CL Id
UBERON Id
Image Id
Tissue Image ID
1
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
3160202000000000000000
066
Trunk
Thymus
Lobule of thymus
Medulla of thymus
Medullary thymocyte
t035
,
t036
,
t037
SHOGoiN Cell Marker
Cell Type Name
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Cell Type Subclass
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
Medullary thymocyte
SHOGoiN Cell Id
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
3160202000000000000000-066
Anatomical Location
Thymus
Thymus
Thymus
Thymus
Thymus
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Bone marrow
Marker Molecule:name
T-cell differentiation antigen CD6 (T12, TP120, CD6)
CD27 antigen (CD27L receptor, T-cell activation antigen CD27, T14, Tumor necrosis factor receptor superfamily member 7, CD27, TNFRSF7)
CD99 antigen (12E7, E2 antigen, Protein MIC2, T-cell surface glycoprotein E2, CD99, MIC2X)
Signaling lymphocytic activation molecule (CDw150, IPO-3, CD150, SLAMF1, SLAM)
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-cyclic-ADP-ribose transferase, ADP-ribosyl cyclase 1, ADPRC 1, cADPr hydrolase 1, T10, CD38)
T-cell surface antigen CD2 (Erythrocyte receptor, LFA-2, LFA-3 receptor, Rosette receptor, T-cell surface antigen T11/Leu-5, SRBC, CD2)
T-cell surface glycoprotein CD3 epsilon chain (T-cell surface antigen T3/Leu-4 epsilon chain, CD3e, T3E)
T-cell surface glycoprotein CD3 delta chain (T-cell receptor T3 delta chain, CD3d, T3D)
T-cell surface glycoprotein CD3 gamma chain (T-cell receptor T3 gamma chain, CD3g, T3G)
T-cell surface glycoprotein CD5 (Lymphocyte antigen T1/Leu-1, CD5)
T-cell antigen CD7 (GP40, T-cell leukemia antigen, T-cell surface antigen Leu-9, TP41, CD7)
T-cell-specific surface glycoprotein CD28 (TP44, CD28)
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-ADP-ribosyl cyclase/2'-phospho-cyclic-ADP-ribose transferase, 2'-phospho-cyclic-ADP-ribose transferase, AD
CD48 antigen (B-lymphocyte activation marker BLAST-1, BCM1 surface antigen, Leukocyte antigen MEM-102, SLAM family member 2, SLAMF2, Signaling lymphocytic activation molecule 2, TCT.1, CD48)
Integrin alpha-4 (CD49 antigen-like family member D, Integrin alpha-IV, VLA-4 subunit alpha, CD49d, ITGA4)
Integrin alpha-6 (CD49 antigen-like family member F, VLA-6, CD49f, ITGA6)
CAMPATH-1 antigen ( CDw52, Cambridge pathology 1 antigen, Epididymal secretory protein E5, Human epididymis-specific protein 5, He5, CD52)
Early activation antigen CD69 (Activation inducer molecule, AIM, BL-AC/P26, C-type lectin domain family 2 member C, EA1, Early T-cell activation antigen p60, GP32/28, Leukocyte surface antigen Leu-23
Interleukin-1 receptor type 1, IL-1R-1, IL-1RT-1, IL-1RT1 (CD121 antigen-like family member A, Interleukin-1 receptor alpha, IL-1R-alpha, Interleukin-1 receptor type I, p80, CD121a )
Interleukin-7 receptor subunit alpha, IL-7 receptor subunit alpha, IL-7R subunit alpha, IL-7R-alpha, IL-7RA (CDw127, CD127)
Poliovirus receptor (Nectin-like protein 5, NECL-5, CD155, PVR, PVS)
CD165
Hyaluronan mediated motility receptor (Intracellular hyaluronic acid-binding protein, Receptor for hyaluronan-mediated motility, CD168, HMMR, IHABP, RHAMM)
OX-2 membrane glycoprotein (CD200, MOX1, MOX2)
Marker Molecule:type
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Marker Molecule:category
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
Subcellular Localization
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane, Secreted
Plasma membrane, Secreted
Plasma membrane
Plasma membrane, Cytosol
Plasma membrane
Uniprot Id
P30203
P26842
P14209
Q13291
P28907
P06729
P07766
P04234
P09693
P06127
P09564
P10747
P28907
P09326
P13612
P23229
P31358
Q07108
P14778
P16871
P15151
O75330
P41217
Gene Id
Source Organism
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Reference
https://www.beckmancoulter.com/wsrportal/page/itemDetails?itemNumber=IM2651U#2/10//0/25/1/0/asc/2/IM2651U///0/1//0/