Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
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All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell ID: 405
SHOGoiN Cell Taxonomy
Homo sapiens
&
Mus musculus
cell
Differentiated (9)
Stem (0)
Embryo (0)
No.
Germ Layer
Differentiation State
Source Age
Anatomy Id
Cell Type Id
Anatomy:body Part
Anatomy:organ
Anatomy:sub-organ
Anatomy:tissue 1
Anatomy:tissue 2
Anatomy:tissue 3
Anatomy:tissue 4
Anatomy:tissue 5-1
Anatomy:tissue 5-2
Anatomy:tissue 5-3
Anatomy:tissue 5-4
Cell Type
Synonym
CL Id
UBERON Id
Image Id
Tissue Image ID
1
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
1000002010103000000000
405
Head
Skin
Facial skin
Dermis
Papillary layer
Fibrocyte
CL:0000135
2
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
1000002010104000000000
405
Head
Skin
Facial skin
Dermis
Reticular layer
Fibrocyte
CL:0000135
3
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
1000002010300000000000
405
Head
Skin
Facial skin
Subcutis
Fibrocyte
CL:0000135
4
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
3080000000000000000000
405
Trunk
Lung
Fibrocyte
CL:0000135
5
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
3210000000100000000000
405
Trunk
Ureter
Adventitia
Fibrocyte
CL:0000135
t097
6
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
6000004010300000000000
405
Ubiquitous
Skin
Dermis
Papillary layer
Fibrocyte
CL:0000135
7
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
6000004010400000000000
405
Ubiquitous
Skin
Dermis
Reticular layer
Fibrocyte
CL:0000135
8
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
6000004050000000000000
405
Ubiquitous
Skin
Subcutis
Fibrocyte
CL:0000135
9
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
6000300000000000000000
405
Ubiquitous
Circulating
Fibrocyte
CL:0000135
SHOGoiN Cell Conversion
Source Cell Type
Cell
Cell
Cell
Cell
Cell
Source Cell Name
Monocyte
Fibrocyte
Fibrocyte
Monocyte
Fibrocyte
Source Cell Type Id
011
405
405
011
405
Destination Cell Type
Cell
Cell
Cell
Cell
Cell
Destination Cell Name
Fibrocyte
Myofibroblast
Myofibroblast
Fibrocyte
Fibroblast
Destination Cell Type Id
405
186
186
405
120
Differentiation Type
Differentiation
Transdifferentiation
Transdifferentiation
Differentiation
Differentiation
Reference
PMID:20404807
PMID:18421080
PMID:16757516
PMID:22890933
PMID:22890933