Human Omics database for
the Generation of iPS and Normal Cells
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Statistics
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All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell ID: 793
SHOGoiN Cell Taxonomy
Homo sapiens
&
Mus musculus
cell
Differentiated (0)
Stem (0)
Embryo (18)
No.
Germ Layer
Differentiation State
Source Age
Anatomy Id
Cell Type Id
Anatomy:body Part
Anatomy:organ
Anatomy:sub-organ
Anatomy:tissue 1
Anatomy:tissue 2
Anatomy:tissue 3
Anatomy:tissue 4
Anatomy:tissue 5-1
Anatomy:tissue 5-2
Anatomy:tissue 5-3
Anatomy:tissue 5-4
Cell Type
Synonym
CL Id
UBERON Id
Image Id
Tissue Image ID
1
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110000000000000000000
793
Embryo
Neurula
Neural crest cell
2
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110001000300000000000
793
Embryo
Neurula
Neural plate
Neural plate border
Neural crest cell
3
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002010000000000000
793
Embryo
Neurula
Neural tube
Neural crest
Neural crest cell
4
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002010100000000000
793
Embryo
Neurula
Neural tube
Neural crest
Cranial neural crest
Neural crest cell
5
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002010200000000000
793
Embryo
Neurula
Neural tube
Neural crest
Rhombencephalon (hindbrain)
Neural crest cell
6
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002012801000000000
793
Embryo
Neurula
Neural tube
Neural crest
Rhombencephalon (hindbrain)
Lateral
Rhombic lip progenitor cell
7
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002012802000000000
793
Embryo
Neurula
Neural tube
Neural crest
Rhombencephalon (hindbrain)
Medial
Rhombic lip progenitor cell
8
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002010900000000000
793
Embryo
Neurula
Neural tube
Neural crest
Diencephalon
Neural crest cell
9
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002011900000000000
793
Embryo
Neurula
Neural tube
Neural crest
Trunk neural crest
Neural crest cell
10
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002012100000000000
793
Embryo
Neurula
Neural tube
Neural crest
Cardiac neural crest
Neural crest cell
11
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002012200000000000
793
Embryo
Neurula
Neural tube
Neural crest
Vagal neural crest
Neural crest cell
12
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110002012300000000000
793
Embryo
Neurula
Neural tube
Neural crest
Scaral neural crest
Neural crest cell
13
2
Ectodermal
3
Multipotent/Progenitor/Precursor
5
Pharyngula state
7110003010000000000000
793
Embryo
Neurula
Pharyngeal arch
Pharyngeal arch 1 (mandibular arch, Meckel’s cartilage)
Neural crest cell
14
2
Ectodermal
3
Multipotent/Progenitor/Precursor
6
Fetus state
7110003020000000000000
793
Embryo
Neurula
Pharyngeal arch
Pharyngeal arch 2 (hyoid arch, Reichert's cartilage)
Neural crest cell
15
2
Ectodermal
3
Multipotent/Progenitor/Precursor
5
Pharyngula state
6
Fetus state
7110003060000000000000
793
Embryo
Neurula
Pharyngeal arch
Pharyngeal arch 3, 4, 6
Neural crest cell
16
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
7110011000000000000000
793
Embryo
Neurula
Prechordal mesoderm
Neural crest cell
17
2
Ectodermal
3
Multipotent/Progenitor/Precursor
6
Fetus state
7110012000000000000000
793
Embryo
Neurula
Head mesenchyme
Neural crest cell
18
2
Ectodermal
3
Multipotent/Progenitor/Precursor
4
Neurula state
5
Pharyngula state
6
Fetus state
7110013000000000000000
793
Embryo
Neurula
Prechordal mesenchyme
Neural crest cell
SHOGoiN Cell Conversion
Source Cell Type
Cell
Cell
Stem cell
Stem cell
Stem cell
Stem cell
Source Cell Name
Fibroblast
Fibroblast
Hematopoietic stem cell
Embryonic stem cell
Embryonic stem cell
Embryonic stem cell
Source Cell Type Id
120
120
724
715
715
715
Destination Cell Type
Stem cell
Stem cell
Stem cell
Stem cell
Stem cell
Stem cell
Destination Cell Name
Neural crest cell
Neural crest cell
Neural crest cell
Neural crest cell (cranial neural crest)
Neural crest cell
Neural crest cell
Destination Cell Type Id
793
793
793
793
793
793
Differentiation Type
Transdifferentiation
Transdifferentiation
Transdifferentiation
Differentiation
Differentiation
Differentiation
Reference
PMID:25158936
PMID:22683203
PMID:26004181
PMID:22084120
PMID:20360764
PMID:18037878