Image : Cell Image ID 324

No.

SHOGoiN cell id

Image (Image ID)

Title

Sample

Method

Contact

Morphologic Feature

Note

1010201000400000000000-134

324

Cerebrum:Glial cell:Human

Location	Cerebrum
Age	62
Sex	male
Race	Japanese
Disease	acute cardiac infarction
Cause Of Death	-
Date	2010.12.10
Condition	normal tissue or mild epithelial hyperplasia

Embedding Mehtod
Staining Mehtod	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size (pixels)	1200x1600
Resolution (ppi)	72
magnification	400

Person	Koji Yamanegi
E-mail	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Address	1-1, Mukogawa, Nishinomiya, Hyogo

	Cell	Nucleus		Nucleus/Cell
Area	1933	703	Area ratio	0.363683
Circularity	0.598381	0.850095	Eccentricity1	0.0207924
Convex area	2295	764	Eccentricity2	0.0188533
Bending energy	3.02353	1.47826	Eccentricity3	0.0390341
Elliptic long axis	53.0412	35.0602	Eccentricity3	0.0390341
Inertia moment	630969	83233.6	Eccentricity4	0.0285223

SHOGoiN Cell Taxonomy

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Anatomy:tissue 5-1	Anatomy:tissue 5-2	Anatomy:tissue 5-3	Anatomy:tissue 5-4	Cell Type	Synonym	CL Id	UBERON Id	Image Id	Tissue Image ID
1	2 Ectodermal	4 Terminally differentiated	7 Postnatal 8 Neonatal 9 Infant 10 Juvenile 11 Adult	1010201000400000000000	134	Head	Brain	Cerebrum	Cerebral cortex		Cortical layer IV (internal granular layer)						Glial cell		CL:0000125	UBERON:0005393	322, 323, 324, 325

Image

SHOGoiN Cell Id	1010201000400000000000-134	1010201000400000000000-134	1010201000400000000000-134	1010201000400000000000-134
Image Id	322	323	324	325
Tissue	Cerebrum	Cerebrum	Cerebrum	Cerebrum
Cell Type	Glial cell	Glial cell	Glial cell	Glial cell
Organism	Human	Human	Human	Human
Cell Strain
Location	Cerebrum	Cerebrum	Cerebrum	Cerebrum
Karyotype
Race	Japanese	Japanese	Japanese	Japanese
Age	62	62	62	62
Sex	male	male	male	male
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	acute cardiac infarction	acute cardiac infarction	acute cardiac infarction	acute cardiac infarction
Cod
Shooting Date	2010.12.10	2010.12.10	2010.12.10	2010.12.10
Shooting Condition	normal tissue or mild epithelial hyperplasia	normal tissue or mild epithelial hyperplasia	normal tissue or mild epithelial hyperplasia	normal tissue or mild epithelial hyperplasia
Embedding
Staining	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin
Microscope	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50
Camera	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20
Image Size X	1600	1600	1600	1600
Image Size Y	1200	1200	1200	1200
Resolution	72	72	72	72
Magnification	400	400	400	400
Contact Person	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432
Fax	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501	663-8501	663-8501	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan	Japan	Japan	Japan
Note
Nucleous Area	562.5	460.5	703	408
Nucleous Circularity	0.859835	0.900052	0.850095	0.802288
Nucleous Bending	1.79221	0.463768	1.47826	3.14286
Nucleous Convex Area	614	504	764	9999
Nucleous Ellipse Long Axis	30.8501	24.8475	35.0602	25.4547
Nucleous Inertia	52521.5	33889.6	83233.6	27507.5
Cell Area	929	1061.5	1933	1584.5
Cell Circularity	0.446588	0.491437	0.598381	0.361057
Cell Bending	3.83824	3.78102	3.02353	4.13472
Cell Convex Area	1147	1290	2295	2183
Cell Ellipse Long Axis	41.8034	39.9662	53.0412	62.0467
Cell Inertia	150749	185581	630969	513172
Cell-nucleous Area Ratio	0.60549	0.43382	0.363683	0.257494
Cell-nucleous Eccentricity1	0.106748	0.115096	0.0207924	0.174216
Cell-nucleous Eccentricity2	0.0756464	0.100085	0.0188533	0.103198
Cell-nucleous Eccentricity3	0.135515	0.169306	0.0390341	0.311711
Cell-nucleous Eccentricity4	0.102505	0.160982	0.0285223	0.25155