Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
Image : Cell Image ID 40
No.
SHOGoiN cell id
Image (Image ID)
Title
Sample
Method
Contact
Morphologic Feature
Note
1
8010000000000000000000-001
40
Immune system (blood):B cell:Human
Location
Pancreas
Age
50
Sex
Male
Race
Japanese
Disease
malignant pleural mesothelioma
Cause Of Death
-
Date
2007.7.23
Condition
normal or mild columnar epithelium hyperplasia
Embedding Mehtod
Paraffin
Staining Mehtod
Hematoxylin
Microscope
OLYMPUS DX50
Camera
OLYMPUS DP20
Image Size (pixels)
1200x1600
Resolution (ppi)
72
magnification
400
Person
Koji Yamanegi
E-mail
yamanegi@hyo-med.ac.jp
Telephone
0798-45-6432
Fax
0798-45-6431
Affiliation
Department of clinical pathology, Hyogo collage of medicine
Address
1-1, Mukogawa, Nishinomiya, Hyogo
Cell
Nucleus
Nucleus/Cell
Area
3629.5
646
Area ratio
0.18
Circularity
0.49
0.88
Eccentricity1
0.04
Convex area
4243
67804.1
Eccentricity2
0.02
Bending energy
3.73
698
Eccentricity3
0.08
Elliptic long axis
94.21
31.18
Eccentricity3
0.08
Inertia moment
2.61E+06
1.51
Eccentricity4
0.06
SHOGoiN Cell Taxonomy
Homo sapiens
&
Mus musculus
cell
Differentiated (1)
Stem (0)
Embryo (0)
No.
Germ Layer
Differentiation State
Source Age
Anatomy Id
Cell Type Id
Anatomy:body Part
Anatomy:organ
Anatomy:sub-organ
Anatomy:tissue 1
Anatomy:tissue 2
Anatomy:tissue 3
Anatomy:tissue 4
Anatomy:tissue 5-1
Anatomy:tissue 5-2
Anatomy:tissue 5-3
Anatomy:tissue 5-4
Cell Type
Synonym
CL Id
UBERON Id
Image Id
Tissue Image ID
1
4
Mesodermal
4
Terminally differentiated
6
Fetus
7
Postnatal
8
Neonatal
9
Infant
10
Juvenile
11
Adult
8010000000000000000000
001
Immune system class
Blood
B cell
CL:0000236
40
SHOGoiN Cell Transcriptome
Expression Profile
SAMN02870136
SAMN02870137
SHOGoiN Cell Id
8010000000000000000000-001
8010000000000000000000-001
Project Name
Sequence Read Archive
Sequence Read Archive
Project Id
SRP043513
SRP043513
Assay Id
SRP043513_T1
SRP043513_T2
Project:project Title
Single Cell RNAseq data and PacBio amplicon sequencing data
Single Cell RNAseq data and PacBio amplicon sequencing data
Project:project Description
http://www.ncbi.nlm.nih.gov/sra/SRX620799[accn]
http://www.ncbi.nlm.nih.gov/sra/SRX620799[accn]
Project:project Submission Date
Project:organization Name
Project:stable Contact Information
Project:reference Submission Status
Project:reference Authors
Project:reference Title
Project:reference Pubmed Id
Assay:assay Type
Transcriptome
Transcriptome
Assay:assay Factor
8010000000000000000000-001
8010000000000000000000-001
Source Cell:sample Id
SAMN02870136
SAMN02870137
Source Cell:SHOGoiN Cell Id
8010000000000000000000-001
8010000000000000000000-001
Source Cell:source Cell Type
B cell, IgM expressing
B cell, IgA expressing
Source Cell:source Organism
Human
Human
Source Cell:race Or Strain
Source Cell:age Or Stage
Source Cell:source Tissue Or Organ
Blood
Blood
Source Cell:source Cell Karyotype
Source Cell:cell Lineage
Source Cell:organism Genetic Information
Source Cell:health Status
Source Cell:source Provider
Stanford Blood Center
Stanford Blood Center
Technology:assay Technology
RNA-seq
RNA-seq
Technology:assay Detection Instrumentation
HiSeq 2000
HiSeq 2000
Technology:assay Detection Instrument Vendor
Illumina
Illumina
Technology:assessed Material
Technology:source Cell Format
Technology:source Cell Preparation Method
Single cell
Single cell
Technology:source Cell Identidication Method
Technology:source Cell Treatment
Data:data Id
SRR1449122
SRR1449123
Data:data Type
Sequence
Sequence
Data:data Processing Method
Data:data Processing Software And Version
Data:data Normalization Method
Data:data Normalization Software Name And Version
Data:data Analytical Software And Version
Data:reference Sequence Source
Data:genome Annotation Ref
SHOGoiN Cell Marker
Cell Type Name
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Immune system/blood cell
Cell Type Subclass
Activated Bcell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
Activated B Cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
B cell
Mature B Cell
SHOGoiN Cell Id
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
8010000000000000000000-001
Anatomical Location
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Blood
Marker Molecule:name
Leukosialin (Galactoglycoprotein, CD43)
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-cyclic-ADP-ribose transferase, ADP-ribosyl cyclase 1, ADPRC 1, cADPr hydrolase 1, T10, CD38)
Tumor necrosis factor receptor superfamily member 8 (CD30L receptor, Ki-1 antigen, Lymphocyte activation antigen CD30, TNFRSF8, D1S166E)
Early activation antigen CD69 (Activation inducer molecule, AIM, EA1, Early T-cell activation antigen p60, Leukocyte surface antigen Leu-23, MLR-3, CD69, CLEC2C)
CD70 antigen (CD27 ligand, Tumor necrosis factor ligand superfamily member 7, CD70, CD27L, CD27LG, TNFSF7
Transferrin receptor protein 1 (TR, TfR, TfR1, Trfr, T9, p90, CD71, TFRC)
T-lymphocyte activation antigen CD80 (Activation B7-1 antigen, BB1, CD80, CD28LG, CD28LG1, LAB7)
T-lymphocyte activation antigen CD86 (Activation B7-2 antigen, B70, BU63, FUN-1, CD86, CD28LG2)
Interleukin-2 receptor subunit alpha, IL-2 receptor subunit alpha, IL-2-RA, IL-2R subunit alpha, IL2-RA (TAC antigen, p55, CD25, IL2RA)
Dipeptidyl peptidase 4 (EC:3.4.14.51 Publication) (ADABP, Adenosine deaminase complexing protein 2, Dipeptidyl peptidase IV, DPP IV, T-cell activation antigen CD26, TP103, CD26, DPP4, ADCP2)
T-cell-specific surface glycoprotein CD28 (TP44, CD28)
CD83 antigen, hCD83 (B-cell activation protein, Cell surface protein HB15, CD83)
CD166 antigen (Activated leukocyte cell adhesion molecule, CD166, ALCAM, MEMD)
Tumor necrosis factor ligand superfamily member 4 (Glycoprotein Gp34, OX40 ligand, OX40L, CD252, TNFSF4, TXGP1)
Tumor necrosis factor ligand superfamily member 10 (Apo-2 ligand, TNF-related apoptosis-inducing ligand, Protein TRAIL, CD253, TNFSF10, APO2L, TRAIL)
Tumor necrosis factor receptor superfamily member 13C (B-cell-activating factor receptor, BAFF receptor, BLyS receptor 3, CD268, TNFRSF13C, BAFFR, BR3)
ICOS ligand (B7 homolog 2, B7-like protein Gl50, B7-related protein 1, B7RP-1, CD275, ICOSLG, B7H2, B7RP1, ICOSL, KIAA0653)
Programmed cell death protein 1(Protein PD-1, hPD-1, CD279, PDCD1, PD1)
Toll-like receptor 9 (CD289, TLR9)
Fc receptor-like protein 2, FcRL2 (Fc receptor homolog 2, FcRH2, IFGP family protein 4, CD307b, FCRL2, FCRH2, IFGP4, IRTA4, SPAP1)
Fc receptor-like protein 4, FcRL4 (Fc receptor homolog 4, FcRH4, hIFGP2, Immune receptor translocation-associated protein 1, CD307d, FCRL4, IFGP2, IRTA1)
Fc receptor-like protein 3 (Fc receptor homolog 3, FcRH3, IFGP family protein 3, hIFGP3, Immune receptor translocation-associated protein 3, CD307c, FCRL3, FCRH3, IFGP3, IRTA3, SPAP2)
Fc receptor-like protein 1, FcRL1 (Fc receptor homolog 1, hIFGP1, Immune receptor translocation-associated protein 5, CD307a, FCRL1, FCRH1, IFGP1, IRTA5)
Fc receptor-like protein 5, FcR-like protein 5, FcRL5 (BXMAS1, Immune receptor translocation-associated protein 2, CD307e, FCRL5, FCRH5, IRTA2)
Immunoglobulin superfamily member 8 (CD81 partner 3, Keratinocytes-associated transmembrane protein 4, LIR-D1, Prostaglandin regulatory-like protein, PGRL, CD316, IGSF8, CD81P3, EWI2, KCT4)
Bone marrow stromal antigen 2 (HM1.24 antigen, Tetherin, CD317, BST2
Receptor-type tyrosine-protein phosphatase C (CD45, Leukocyte common antigen, T200)
Signal transducer CD24 (Small cell lung carcinoma cluster 4 antigen, CD24, CD24A)
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-cyclic-ADP-ribose transferase, ADP-ribosyl cyclase 1, ADPRC 1, cADPr hydrolase 1, T10, CD38)
B-cell receptor CD22 (B-lymphocyte cell adhesion molecule, BL-CAM, Sialic acid-binding Ig-like lectin 2, Siglec-2, T-cell surface antigen Leu-14, CD22)
C-X-C chemokine receptor type 4 (CXC-R4, CXCR-4, FB22, Fusin, HM89, LCR1, Leukocyte-derived seven transmembrane domain receptor, LESTR, Lipopolysaccharide-associated protein 3, LAP-3, LPS-associated p
B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4, Differentiation antigen CD19, T-cell surface antigen Leu-12, CD19)
B-lymphocyte antigen CD20 (B-lymphocyte surface antigen B1, Bp35, Leukocyte surface antigen Leu-16, Membrane-spanning 4-domains subfamily A member 1, MS4A1, CD20)
Complement receptor type 2 (Cr2, Complement C3d receptor, Epstein-Barr virus receptor, EBV receptor, CD21, CR2, C3DR)
Leukocyte antigen CD37 (Tetraspanin-26, Tspan-26, CD37, TSPAN26)
Tumor necrosis factor receptor superfamily member 5 (B-cell surface antigen CD40, Bp50, CD40L receptor, CDw40, CD40, TNFRSF5)
Beta-galactoside alpha-2,6-sialyltransferase 1 (Alpha 2,6-ST 1, B-cell antigen CD75, ST6Gal I, ST6GalI, Sialyltransferase 1, ST6GAL1, SIAT1)
B-cell antigen receptor complex-associated protein alpha chain (Ig-alpha, MB-1 membrane glycoprotein, Membrane-bound immunoglobulin-associated protein, Surface IgM-associated protein, CD79a, IGA, MB1)
B-cell antigen receptor complex-associated protein beta chain (B-cell-specific glycoprotein B29, Ig-beta, Immunoglobulin-associated B29 protein, CD79b)
Low affinity immunoglobulin gamma Fc region receptor II-a (IgG Fc receptor II-a, CDw32, Fc-gamma RII-a, Fc-gamma-RIIa, FcRII-a, CD32, FCGR2A)
Low affinity immunoglobulin gamma Fc region receptor II-b (IgG Fc receptor II-b, CDw32, Fc-gamma RII-b, Fc-gamma-RIIb, FcRII-b, CD32, FCGR2B, FCG2, IGFR2)
Low affinity immunoglobulin gamma Fc region receptor II-c (IgG Fc receptor II-c, CDw32, Fc-gamma RII-c, Fc-gamma-RIIc, FcRII-c, CD32, FCGR2C, FCG2, IGFR2)
Complement receptor type 1 (C3b/C4b receptor, CD35, CR1, C3BR)
Ectonucleoside triphosphate diphosphohydrolase 1 ( NTPDase 1, Ecto-ATP diphosphohydrolase 1, Ecto-ATPase 1, Ecto-apyrase, Lymphoid cell activation antigen, CD39, ENTPD1)
CD48 antigen (B-lymphocyte activation marker BLAST-1, BCM1 surface antigen, Leukocyte antigen MEM-102, SLAM family member 2, SLAMF2, Signaling lymphocytic activation molecule 2, TCT.1, CD48)
Integrin alpha-2 (CD49 antigen-like family member B, Collagen receptor, Platelet membrane glycoprotein Ia, GPIa, VLA-2 subunit alpha, CD49b, ITGA2, CD49B)
Integrin alpha-3 (CD49 antigen-like family member C, FRP-2, Galactoprotein B3, GAPB3, VLA-3 subunit alpha, CD49c, ITGA3, MSK18)
Integrin alpha-4 (CD49 antigen-like family member D, Integrin alpha-IV, VLA-4 subunit alpha, ITGA4, CD49D)
CAMPATH-1 antigen (CDw52, Cambridge pathology 1 antigen, Epididymal secretory protein E5, Human epididymis-specific protein 5, He5, CD52)
B-cell differentiation antigen CD72 (Lyb-2, CD72)
HLA class II histocompatibility antigen gamma chain (HLA-DR antigens-associated invariant chain, Ia antigen-associated invariant chain, p33, CD74, DHLAG)
CD75s
CD78
SLAM family member 5 (Cell surface antigen MAX.3, Hly9-beta, Leukocyte differentiation antigen CD84, Signaling lymphocytic activation molecule 5, CD84, SLAMF5)
4F2 cell-surface antigen heavy chain (4F2hc, 4F2 heavy chain antigen, Lymphocyte activation antigen 4F2 large subunit, Solute carrier family 3 member 2, CD98, SLC3A2, MDU1)
CD99 antigen (12E7, E2 antigen, Protein MIC2, T-cell surface glycoprotein E2, CD99, MIC2X)
Intercellular adhesion molecule 2 (ICAM-2, Lymphocyte function-associated AG-1 counter-receptor, CD102, Icam2)
Interferon gamma receptor 1 (IFN-gamma receptor 1, IFN-gamma-R1, CDw119, CD119, IFNGR1)
Interleukin-1 receptor type 2 (IL-1R-2, IL-1RT2, CD121 antigen-like family member B, CDw121b, IL-1R-beta, Interleukin-1 receptor type II, CD121b, IL1R2, IL1RB)
Interleukin-4 receptor subunit alpha (IL-4 receptor subunit alpha, IL-4R subunit alpha, IL-4R-alpha, IL-4RA, CD124, IL4R, IL4RA)
Neural cell adhesion molecule L1 (NCAM-L1, CD171, L1CAM, CAML1, MIC5)
CDw210
CD213a1
CD213a2
T-lymphocyte surface antigen Ly-9 ( Cell surface molecule Ly-9, Lymphocyte antigen 9, SLAM family member 3, SLAMF3, Signaling lymphocytic activation molecule 3, CD229, LY9)
C-X-C chemokine receptor type 5 (CXCR-5, Monocyte-derived receptor 15, MDR-15, CD185, CXCR5, BLR1, MDR15)
C-C chemokine receptor type 2 (CC-CKR-2, CCR-2, CCR2, Monocyte chemoattractant protein 1 receptor, MCP-1-R, CD192, CMKBR2)
C-C chemokine receptor type 6 (CCR-6, Chemokine receptor-like 3, CKR-L3, DRY6, G-protein coupled receptor 29, GPR-CY4, GPRCY4, LARC receptor, CD196, CCR6, GPR29)
Interleukin-18 receptor 1 (IL-18R-1, IL-18R1, CD218 antigen-like family member A, CDw218a, IL1 receptor-related protein, IL-1Rrp, IL1R-rp, CD218a)
Interleukin-18 receptor accessory protein (IL-18 receptor accessory protein, IL-18RAcP, AcPL, CD218 antigen-like family member B, CDw218b, IL-1RAcPL, Interleukin-1 receptor 7, IL-1R7, Interleukin-18 r
Tumor necrosis factor receptor superfamily member 13B (Transmembrane activator and CAML interactor, CD267, TACI, TNFRSF13B)
Tumor necrosis factor receptor superfamily member 13C (B-cell-activating factor receptor, BAFF receptor, BAFF-R, BLyS receptor 3, CD268, BAFFR, BR3)
Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein, CD269, BCMA, BCM, TNFRSF17)
ICOS ligand (B7 homolog 2, B7-H2, B7-like protein Gl50, B7-related protein 1, B7RP-1, CD275, B7H2, B7RP1, ICOSL, KIAA0653)
Butyrophilin subfamily 3 member A2 (BTN3A2, BT3.2, BTF3, BTF4)
Butyrophilin subfamily 3 member A1 (CD277, BTN3A1, BTF5)
Leukocyte-associated immunoglobulin-like receptor 1 (LAIR-1, hLAIR1, CD305, LAIR1)
Fc receptor-like protein 5 (FcR-like protein 5, BXMAS1, Immune receptor translocation-associated protein 2, CD307, CD307e, FCRL5, IRTA2)
Immunoglobulin superfamily member 8, IgSF8 (CD81 partner 3, EWI-2, Keratinocytes-associated transmembrane protein 4, KCT-4, LIR-D1, Prostaglandin regulatory-like protein, PGRL, CD316, IGSF8, CD81P3, E
Bone marrow stromal antigen 2 (CD317, BST-2, HM1.24 antigen, Tetherin, BST2)
Junctional adhesion molecule B (JAM-B, Junctional adhesion molecule 2, JAM-2, Vascular endothelial junction-associated molecule, VE-JAM, CD322, JAM2, C21orf43, VEJAM)
Sialic acid-binding Ig-like lectin 6 (Siglec-6, CD33 antigen-like 1, CDw327, Obesity-binding protein 1, OB-BP1, CD327, SIGLEC6, CD33L, OBBP1)
B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4, Differentiation antigen CD19, T-cell surface antigen Leu-12, CD19)
Marker Molecule:type
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
Protein
RNA
Marker Molecule:category
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
CD molecule
Subcellular Localization
Plasma membrane
Plasma membrane
Plasma membrane, Cytosol
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Endoplasmic reticulum, plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane, Golgi apparatus
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane, Secreted
Plasma membrane, Secreted
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane, Secreted
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane, Secreted
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Plasma membrane
Uniprot Id
P16150
P28907
P28908
Q07108
P32970
P02786
P33681
P42081
P01589
P27487
P10747
Q01151
Q13740
P23510
P50591
Q96RJ3
O75144
Q15116
Q9NR96
Q96LA5
Q96PJ5
Q96P31
Q96LA6
Q96RD9
Q969P0
Q10589
P08575
P25063
P28907
P20273
P61073
P15391
P11836
P20023
P11049
P25942
P15907
P11912
P40259
P12318
P31994
P31995
P17927
P49961
P09326
P17301
P26006
P13612
P31358
P21854
P04233
Q9UIB8
P08195
P14209
P13598
P15260
P27930
P24394
P32004
Q9HBG7
P32302
P41597
P51684
Q13478
O95256
O14836
Q96RJ3
Q02223
O75144
Q96RD9
Q969P0
Q10589
P15391
Gene Id
930
Source Organism
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Human
Reference
PMID:22184681
https://www.beckmancoulter.com/wsrportal/page/itemDetails?itemNumber=IM2651U#2/10//0/25/1/0/asc/2/IM2651U///0/1//0/
https://www.bdbiosciences.com/documents/cd_marker_handbook.pdf
https://www.bdbiosciences.com/documents/cd_marker_handbook.pdf
https://www.bdbiosciences.com/documents/cd_marker_handbook.pdf
https://www.bdbiosciences.com/documents/cd_marker_handbook.pdf
https://www.beckmancoulter.com/wsrportal/page/itemDetails?itemNumber=A07409#2/10//0/25/1/0/asc/2/A07409///0/1//0/
PMID:20839338
Image
SHOGoiN Cell Id
8010000000000000000000-001
Image Id
40
Tissue
Immune system (blood)
Cell Type
B cell
Organism
Human
Cell Strain
Location
Pancreas
Karyotype
Race
Japanese
Age
50
Sex
Male
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease
malignant pleural mesothelioma
Cod
Shooting Date
2007.7.23
Shooting Condition
normal or mild columnar epithelium hyperplasia
Embedding
Paraffin
Staining
Hematoxylin
Microscope
OLYMPUS DX50
Camera
OLYMPUS DP20
Image Size X
1600
Image Size Y
1200
Resolution
72
Magnification
400
Contact Person
Koji Yamanegi
Email
yamanegi@hyo-med.ac.jp
Telephone
0798-45-6432
Fax
0798-45-6431
Affiliation
Department of clinical pathology, Hyogo collage of medicine
Zip Code
663-8501
Address
1-1, Mukogawa, Nishinomiya, Hyogo
Country
Japan
Note
Nucleous Area
646
Nucleous Circularity
0.88
Nucleous Bending
698
Nucleous Convex Area
67804.1
Nucleous Ellipse Long Axis
31.18
Nucleous Inertia
1.51
Cell Area
3629.5
Cell Circularity
0.49
Cell Bending
3.73
Cell Convex Area
4243
Cell Ellipse Long Axis
94.21
Cell Inertia
2.61E+06
Cell-nucleous Area Ratio
0.18
Cell-nucleous Eccentricity1
0.04
Cell-nucleous Eccentricity2
0.02
Cell-nucleous Eccentricity3
0.08
Cell-nucleous Eccentricity4
0.06