SHOGoiN Cell Taxonomy

SHOGoiN Cell Transcriptome

Expression Profile	SAMN02870136	SAMN02870137
SHOGoiN Cell Id	8010000000000000000000-001	8010000000000000000000-001
Project Name	Sequence Read Archive	Sequence Read Archive
Project Id	SRP043513	SRP043513
Assay Id	SRP043513_T1	SRP043513_T2
Project:project Title	Single Cell RNAseq data and PacBio amplicon sequencing data	Single Cell RNAseq data and PacBio amplicon sequencing data
Project:project Description	http://www.ncbi.nlm.nih.gov/sra/SRX620799[accn]	http://www.ncbi.nlm.nih.gov/sra/SRX620799[accn]
Project:project Submission Date
Project:organization Name
Project:stable Contact Information
Project:reference Submission Status
Project:reference Authors
Project:reference Title
Project:reference Pubmed Id
Assay:assay Type	Transcriptome	Transcriptome
Assay:assay Factor	8010000000000000000000-001	8010000000000000000000-001
Source Cell:sample Id	SAMN02870136	SAMN02870137
Source Cell:SHOGoiN Cell Id	8010000000000000000000-001	8010000000000000000000-001
Source Cell:source Cell Type	B cell, IgM expressing	B cell, IgA expressing
Source Cell:source Organism	Human	Human
Source Cell:race Or Strain
Source Cell:age Or Stage
Source Cell:source Tissue Or Organ	Blood	Blood
Source Cell:source Cell Karyotype
Source Cell:cell Lineage
Source Cell:organism Genetic Information
Source Cell:health Status
Source Cell:source Provider	Stanford Blood Center	Stanford Blood Center
Technology:assay Technology	RNA-seq	RNA-seq
Technology:assay Detection Instrumentation	HiSeq 2000	HiSeq 2000
Technology:assay Detection Instrument Vendor	Illumina	Illumina
Technology:assessed Material
Technology:source Cell Format
Technology:source Cell Preparation Method	Single cell	Single cell
Technology:source Cell Identidication Method
Technology:source Cell Treatment
Data:data Id	SRR1449122	SRR1449123
Data:data Type	Sequence	Sequence
Data:data Processing Method
Data:data Processing Software And Version
Data:data Normalization Method
Data:data Normalization Software Name And Version
Data:data Analytical Software And Version
Data:reference Sequence Source
Data:genome Annotation Ref

SHOGoiN Cell Marker

Cell Type Name	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell	Immune system/blood cell
Cell Type Subclass	Activated Bcell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	Activated B Cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	B cell	Mature B Cell
SHOGoiN Cell Id	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001	8010000000000000000000-001
Anatomical Location	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood	Blood
Marker Molecule:name	Leukosialin (Galactoglycoprotein, CD43)	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-cyclic-ADP-ribose transferase, ADP-ribosyl cyclase 1, ADPRC 1, cADPr hydrolase 1, T10, CD38)	Tumor necrosis factor receptor superfamily member 8 (CD30L receptor, Ki-1 antigen, Lymphocyte activation antigen CD30, TNFRSF8, D1S166E)	Early activation antigen CD69 (Activation inducer molecule, AIM, EA1, Early T-cell activation antigen p60, Leukocyte surface antigen Leu-23, MLR-3, CD69, CLEC2C)	CD70 antigen (CD27 ligand, Tumor necrosis factor ligand superfamily member 7, CD70, CD27L, CD27LG, TNFSF7	Transferrin receptor protein 1 (TR, TfR, TfR1, Trfr, T9, p90, CD71, TFRC)	T-lymphocyte activation antigen CD80 (Activation B7-1 antigen, BB1, CD80, CD28LG, CD28LG1, LAB7)	T-lymphocyte activation antigen CD86 (Activation B7-2 antigen, B70, BU63, FUN-1, CD86, CD28LG2)	Interleukin-2 receptor subunit alpha, IL-2 receptor subunit alpha, IL-2-RA, IL-2R subunit alpha, IL2-RA (TAC antigen, p55, CD25, IL2RA)	Dipeptidyl peptidase 4 (EC:3.4.14.51 Publication) (ADABP, Adenosine deaminase complexing protein 2, Dipeptidyl peptidase IV, DPP IV, T-cell activation antigen CD26, TP103, CD26, DPP4, ADCP2)	T-cell-specific surface glycoprotein CD28 (TP44, CD28)	CD83 antigen, hCD83 (B-cell activation protein, Cell surface protein HB15, CD83)	CD166 antigen (Activated leukocyte cell adhesion molecule, CD166, ALCAM, MEMD)	Tumor necrosis factor ligand superfamily member 4 (Glycoprotein Gp34, OX40 ligand, OX40L, CD252, TNFSF4, TXGP1)	Tumor necrosis factor ligand superfamily member 10 (Apo-2 ligand, TNF-related apoptosis-inducing ligand, Protein TRAIL, CD253, TNFSF10, APO2L, TRAIL)	Tumor necrosis factor receptor superfamily member 13C (B-cell-activating factor receptor, BAFF receptor, BLyS receptor 3, CD268, TNFRSF13C, BAFFR, BR3)	ICOS ligand (B7 homolog 2, B7-like protein Gl50, B7-related protein 1, B7RP-1, CD275, ICOSLG, B7H2, B7RP1, ICOSL, KIAA0653)	Programmed cell death protein 1(Protein PD-1, hPD-1, CD279, PDCD1, PD1)	Toll-like receptor 9 (CD289, TLR9)	Fc receptor-like protein 2, FcRL2 (Fc receptor homolog 2, FcRH2, IFGP family protein 4, CD307b, FCRL2, FCRH2, IFGP4, IRTA4, SPAP1)	Fc receptor-like protein 4, FcRL4 (Fc receptor homolog 4, FcRH4, hIFGP2, Immune receptor translocation-associated protein 1, CD307d, FCRL4, IFGP2, IRTA1)	Fc receptor-like protein 3 (Fc receptor homolog 3, FcRH3, IFGP family protein 3, hIFGP3, Immune receptor translocation-associated protein 3, CD307c, FCRL3, FCRH3, IFGP3, IRTA3, SPAP2)	Fc receptor-like protein 1, FcRL1 (Fc receptor homolog 1, hIFGP1, Immune receptor translocation-associated protein 5, CD307a, FCRL1, FCRH1, IFGP1, IRTA5)	Fc receptor-like protein 5, FcR-like protein 5, FcRL5 (BXMAS1, Immune receptor translocation-associated protein 2, CD307e, FCRL5, FCRH5, IRTA2)	Immunoglobulin superfamily member 8 (CD81 partner 3, Keratinocytes-associated transmembrane protein 4, LIR-D1, Prostaglandin regulatory-like protein, PGRL, CD316, IGSF8, CD81P3, EWI2, KCT4)	Bone marrow stromal antigen 2 (HM1.24 antigen, Tetherin, CD317, BST2	Receptor-type tyrosine-protein phosphatase C (CD45, Leukocyte common antigen, T200)	Signal transducer CD24 (Small cell lung carcinoma cluster 4 antigen, CD24, CD24A)	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (2'-phospho-ADP-ribosyl cyclase, 2'-phospho-cyclic-ADP-ribose transferase, ADP-ribosyl cyclase 1, ADPRC 1, cADPr hydrolase 1, T10, CD38)	B-cell receptor CD22 (B-lymphocyte cell adhesion molecule, BL-CAM, Sialic acid-binding Ig-like lectin 2, Siglec-2, T-cell surface antigen Leu-14, CD22)	C-X-C chemokine receptor type 4 (CXC-R4, CXCR-4, FB22, Fusin, HM89, LCR1, Leukocyte-derived seven transmembrane domain receptor, LESTR, Lipopolysaccharide-associated protein 3, LAP-3, LPS-associated p	B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4, Differentiation antigen CD19, T-cell surface antigen Leu-12, CD19)	B-lymphocyte antigen CD20 (B-lymphocyte surface antigen B1, Bp35, Leukocyte surface antigen Leu-16, Membrane-spanning 4-domains subfamily A member 1, MS4A1, CD20)	Complement receptor type 2 (Cr2, Complement C3d receptor, Epstein-Barr virus receptor, EBV receptor, CD21, CR2, C3DR)	Leukocyte antigen CD37 (Tetraspanin-26, Tspan-26, CD37, TSPAN26)	Tumor necrosis factor receptor superfamily member 5 (B-cell surface antigen CD40, Bp50, CD40L receptor, CDw40, CD40, TNFRSF5)	Beta-galactoside alpha-2,6-sialyltransferase 1 (Alpha 2,6-ST 1, B-cell antigen CD75, ST6Gal I, ST6GalI, Sialyltransferase 1, ST6GAL1, SIAT1)	B-cell antigen receptor complex-associated protein alpha chain (Ig-alpha, MB-1 membrane glycoprotein, Membrane-bound immunoglobulin-associated protein, Surface IgM-associated protein, CD79a, IGA, MB1)	B-cell antigen receptor complex-associated protein beta chain (B-cell-specific glycoprotein B29, Ig-beta, Immunoglobulin-associated B29 protein, CD79b)	Low affinity immunoglobulin gamma Fc region receptor II-a (IgG Fc receptor II-a, CDw32, Fc-gamma RII-a, Fc-gamma-RIIa, FcRII-a, CD32, FCGR2A)	Low affinity immunoglobulin gamma Fc region receptor II-b (IgG Fc receptor II-b, CDw32, Fc-gamma RII-b, Fc-gamma-RIIb, FcRII-b, CD32, FCGR2B, FCG2, IGFR2)	Low affinity immunoglobulin gamma Fc region receptor II-c (IgG Fc receptor II-c, CDw32, Fc-gamma RII-c, Fc-gamma-RIIc, FcRII-c, CD32, FCGR2C, FCG2, IGFR2)	Complement receptor type 1 (C3b/C4b receptor, CD35, CR1, C3BR)	Ectonucleoside triphosphate diphosphohydrolase 1 ( NTPDase 1, Ecto-ATP diphosphohydrolase 1, Ecto-ATPase 1, Ecto-apyrase, Lymphoid cell activation antigen, CD39, ENTPD1)	CD48 antigen (B-lymphocyte activation marker BLAST-1, BCM1 surface antigen, Leukocyte antigen MEM-102, SLAM family member 2, SLAMF2, Signaling lymphocytic activation molecule 2, TCT.1, CD48)	Integrin alpha-2 (CD49 antigen-like family member B, Collagen receptor, Platelet membrane glycoprotein Ia, GPIa, VLA-2 subunit alpha, CD49b, ITGA2, CD49B)	Integrin alpha-3 (CD49 antigen-like family member C, FRP-2, Galactoprotein B3, GAPB3, VLA-3 subunit alpha, CD49c, ITGA3, MSK18)	Integrin alpha-4 (CD49 antigen-like family member D, Integrin alpha-IV, VLA-4 subunit alpha, ITGA4, CD49D)	CAMPATH-1 antigen (CDw52, Cambridge pathology 1 antigen, Epididymal secretory protein E5, Human epididymis-specific protein 5, He5, CD52)	B-cell differentiation antigen CD72 (Lyb-2, CD72)	HLA class II histocompatibility antigen gamma chain (HLA-DR antigens-associated invariant chain, Ia antigen-associated invariant chain, p33, CD74, DHLAG)	CD75s	CD78	SLAM family member 5 (Cell surface antigen MAX.3, Hly9-beta, Leukocyte differentiation antigen CD84, Signaling lymphocytic activation molecule 5, CD84, SLAMF5)	4F2 cell-surface antigen heavy chain (4F2hc, 4F2 heavy chain antigen, Lymphocyte activation antigen 4F2 large subunit, Solute carrier family 3 member 2, CD98, SLC3A2, MDU1)	CD99 antigen (12E7, E2 antigen, Protein MIC2, T-cell surface glycoprotein E2, CD99, MIC2X)	Intercellular adhesion molecule 2 (ICAM-2, Lymphocyte function-associated AG-1 counter-receptor, CD102, Icam2)	Interferon gamma receptor 1 (IFN-gamma receptor 1, IFN-gamma-R1, CDw119, CD119, IFNGR1)	Interleukin-1 receptor type 2 (IL-1R-2, IL-1RT2, CD121 antigen-like family member B, CDw121b, IL-1R-beta, Interleukin-1 receptor type II, CD121b, IL1R2, IL1RB)	Interleukin-4 receptor subunit alpha (IL-4 receptor subunit alpha, IL-4R subunit alpha, IL-4R-alpha, IL-4RA, CD124, IL4R, IL4RA)	Neural cell adhesion molecule L1 (NCAM-L1, CD171, L1CAM, CAML1, MIC5)	CDw210	CD213a1	CD213a2	T-lymphocyte surface antigen Ly-9 ( Cell surface molecule Ly-9, Lymphocyte antigen 9, SLAM family member 3, SLAMF3, Signaling lymphocytic activation molecule 3, CD229, LY9)	C-X-C chemokine receptor type 5 (CXCR-5, Monocyte-derived receptor 15, MDR-15, CD185, CXCR5, BLR1, MDR15)	C-C chemokine receptor type 2 (CC-CKR-2, CCR-2, CCR2, Monocyte chemoattractant protein 1 receptor, MCP-1-R, CD192, CMKBR2)	C-C chemokine receptor type 6 (CCR-6, Chemokine receptor-like 3, CKR-L3, DRY6, G-protein coupled receptor 29, GPR-CY4, GPRCY4, LARC receptor, CD196, CCR6, GPR29)	Interleukin-18 receptor 1 (IL-18R-1, IL-18R1, CD218 antigen-like family member A, CDw218a, IL1 receptor-related protein, IL-1Rrp, IL1R-rp, CD218a)	Interleukin-18 receptor accessory protein (IL-18 receptor accessory protein, IL-18RAcP, AcPL, CD218 antigen-like family member B, CDw218b, IL-1RAcPL, Interleukin-1 receptor 7, IL-1R7, Interleukin-18 r	Tumor necrosis factor receptor superfamily member 13B (Transmembrane activator and CAML interactor, CD267, TACI, TNFRSF13B)	Tumor necrosis factor receptor superfamily member 13C (B-cell-activating factor receptor, BAFF receptor, BAFF-R, BLyS receptor 3, CD268, BAFFR, BR3)	Tumor necrosis factor receptor superfamily member 17 (B-cell maturation protein, CD269, BCMA, BCM, TNFRSF17)	ICOS ligand (B7 homolog 2, B7-H2, B7-like protein Gl50, B7-related protein 1, B7RP-1, CD275, B7H2, B7RP1, ICOSL, KIAA0653)	Butyrophilin subfamily 3 member A2 (BTN3A2, BT3.2, BTF3, BTF4)	Butyrophilin subfamily 3 member A1 (CD277, BTN3A1, BTF5)	Leukocyte-associated immunoglobulin-like receptor 1 (LAIR-1, hLAIR1, CD305, LAIR1)	Fc receptor-like protein 5 (FcR-like protein 5, BXMAS1, Immune receptor translocation-associated protein 2, CD307, CD307e, FCRL5, IRTA2)	Immunoglobulin superfamily member 8, IgSF8 (CD81 partner 3, EWI-2, Keratinocytes-associated transmembrane protein 4, KCT-4, LIR-D1, Prostaglandin regulatory-like protein, PGRL, CD316, IGSF8, CD81P3, E	Bone marrow stromal antigen 2 (CD317, BST-2, HM1.24 antigen, Tetherin, BST2)	Junctional adhesion molecule B (JAM-B, Junctional adhesion molecule 2, JAM-2, Vascular endothelial junction-associated molecule, VE-JAM, CD322, JAM2, C21orf43, VEJAM)	Sialic acid-binding Ig-like lectin 6 (Siglec-6, CD33 antigen-like 1, CDw327, Obesity-binding protein 1, OB-BP1, CD327, SIGLEC6, CD33L, OBBP1)	B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4, Differentiation antigen CD19, T-cell surface antigen Leu-12, CD19)
Marker Molecule:type	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	Protein	RNA
Marker Molecule:category	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule	CD molecule
Subcellular Localization	Plasma membrane	Plasma membrane	Plasma membrane, Cytosol	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Endoplasmic reticulum, plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane, Golgi apparatus	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane, Secreted	Plasma membrane, Secreted	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane, Secreted	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane, Secreted	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane	Plasma membrane
Uniprot Id	P16150	P28907	P28908	Q07108	P32970	P02786	P33681	P42081	P01589	P27487	P10747	Q01151	Q13740	P23510	P50591	Q96RJ3	O75144	Q15116	Q9NR96	Q96LA5	Q96PJ5	Q96P31	Q96LA6	Q96RD9	Q969P0	Q10589	P08575	P25063	P28907	P20273	P61073	P15391	P11836	P20023	P11049	P25942	P15907	P11912	P40259	P12318	P31994	P31995	P17927	P49961	P09326	P17301	P26006	P13612	P31358	P21854	P04233			Q9UIB8	P08195	P14209	P13598	P15260	P27930	P24394	P32004				Q9HBG7	P32302	P41597	P51684	Q13478	O95256	O14836	Q96RJ3	Q02223	O75144				Q96RD9	Q969P0	Q10589			P15391
Gene Id																																																																																			930
Source Organism	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human
Reference	PMID:22184681	https://www.beckmancoulter.com/wsrportal/page/itemDetails?itemNumber=IM2651U#2/10//0/25/1/0/asc/2/IM2651U///0/1//0/																									https://www.bdbiosciences.com/documents/cd_marker_handbook.pdf	https://www.bdbiosciences.com/documents/cd_marker_handbook.pdf	https://www.bdbiosciences.com/documents/cd_marker_handbook.pdf	https://www.bdbiosciences.com/documents/cd_marker_handbook.pdf	https://www.beckmancoulter.com/wsrportal/page/itemDetails?itemNumber=A07409#2/10//0/25/1/0/asc/2/A07409///0/1//0/																																																				PMID:20839338

Image

SHOGoiN Cell Id	8010000000000000000000-001
Image Id	40
Tissue	Immune system (blood)
Cell Type	B cell
Organism	Human
Cell Strain
Location	Pancreas
Karyotype
Race	Japanese
Age	50
Sex	Male
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	malignant pleural mesothelioma
Cod
Shooting Date	2007.7.23
Shooting Condition	normal or mild columnar epithelium hyperplasia
Embedding	Paraffin
Staining	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size X	1600
Image Size Y	1200
Resolution	72
Magnification	400
Contact Person	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan
Note
Nucleous Area	646
Nucleous Circularity	0.88
Nucleous Bending	698
Nucleous Convex Area	67804.1
Nucleous Ellipse Long Axis	31.18
Nucleous Inertia	1.51
Cell Area	3629.5
Cell Circularity	0.49
Cell Bending	3.73
Cell Convex Area	4243
Cell Ellipse Long Axis	94.21
Cell Inertia	2.61E+06
Cell-nucleous Area Ratio	0.18
Cell-nucleous Eccentricity1	0.04
Cell-nucleous Eccentricity2	0.02
Cell-nucleous Eccentricity3	0.08
Cell-nucleous Eccentricity4	0.06