Image : Cell Image ID 877

No.

SHOGoiN cell id

Image (Image ID)

Title

Sample

Method

Contact

Morphologic Feature

Note

1030005040202000200000-207

877

Eyeball:Pigment epithelial cell:Human

Location	Eyeball
Age	65
Sex	Female
Race	Japanese
Disease	Orbital sebaceous carcinoma
Cause Of Death	-
Date	2014.02.24
Condition

Embedding Mehtod	Paraffin
Staining Mehtod	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size (pixels)	1200x1600
Resolution (ppi)	72
magnification	400

Person	Koji Yamanegi
E-mail	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Address	1-1, Mukogawa, Nishinomiya, Hyogo

	Cell	Nucleus		Nucleus/Cell
Area	563.5	1598	Area ratio	2.83585
Circularity	0.822061	0.41192	Eccentricity1	0.221373
Convex area	607	2144	Eccentricity2	0.161121
Bending energy	1.86667	3.03226	Eccentricity3	0.113359
Elliptic long axis	31.6471	49.0552	Eccentricity3	0.113359
Inertia moment	53720.4	452547	Eccentricity4	0.103945

SHOGoiN Cell Taxonomy

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Anatomy:tissue 5-1	Anatomy:tissue 5-2	Anatomy:tissue 5-3	Anatomy:tissue 5-4	Cell Type	Synonym	CL Id	UBERON Id	Image Id	Tissue Image ID
1	2 Ectodermal	4 Terminally differentiated	6 Fetus 7 Postnatal 8 Neonatal 9 Infant 10 Juvenile 11 Adult	1030005040202000200000	207	Head	Eye		Eyeball	Uvea (tunica vasculosa bulbi)	Ciliary body	Pars ciliaris of the retina		Pigment epithelium			Pigment epithelial cell		CL:0002565		876, 877, 878

Image

SHOGoiN Cell Id	1030005040202000200000-207	1030005040202000200000-207	1030005040202000200000-207
Image Id	876	877	878
Tissue	Eyeball	Eyeball	Eyeball
Cell Type	Pigment epithelial cell	Pigment epithelial cell	Pigment epithelial cell
Organism	Human	Human	Human
Cell Strain
Location	Eyeball	Eyeball	Eyeball
Karyotype
Race	Japanese	Japanese	Japanese
Age	65	65	65
Sex	Female	Female	Female
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma
Cod
Shooting Date	2014.02.24	2014.02.24	2014.02.24
Shooting Condition
Embedding	Paraffin	Paraffin	Paraffin
Staining	Hematoxylin	Hematoxylin	Hematoxylin
Microscope	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50
Camera	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20
Image Size X	1600	1600	1600
Image Size Y	1200	1200	1200
Resolution	72	72	72
Magnification	400	400	400
Contact Person	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432	0798-45-6432	0798-45-6432
Fax	0798-45-6431	0798-45-6431	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501	663-8501	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan	Japan	Japan
Note
Nucleous Area	2377.5	1598	4609
Nucleous Circularity	0.516316	0.41192	0.410138
Nucleous Bending	2.83092	3.03226	2.92308
Nucleous Convex Area	2868	2144	5611
Nucleous Ellipse Long Axis	64.843	49.0552	82.2463
Nucleous Inertia	952481	452547	3.61E+06
Cell Area	514	563.5	1337.5
Cell Circularity	0.874524	0.822061	0.861961
Cell Bending	1.71053	1.86667	1.2562
Cell Convex Area	563	607	1415
Cell Ellipse Long Axis	28.7469	31.6471	46.2734
Cell Inertia	43435.7	53720.4	293797
Cell-nucleous Area Ratio	4.62549	2.83585	3.44598
Cell-nucleous Eccentricity1	0.571087	0.221373	0.164417
Cell-nucleous Eccentricity2	0.452222	0.161121	0.131453
Cell-nucleous Eccentricity3	0.269845	0.113359	0.0829388
Cell-nucleous Eccentricity4	0.200484	0.103945	0.0739579