Image : Cell Image ID 924

No.

SHOGoiN cell id

Image (Image ID)

Title

Sample

Method

Contact

Morphologic Feature

Note

1030005010100000000000-258

924

Eyeball:Vascular endothelial cell:Human

Location	Eyeball
Age	65
Sex	Female
Race	Japanese
Disease	Orbital sebaceous carcinoma
Cause Of Death	-
Date	2014.02.24
Condition

Embedding Mehtod	Paraffin
Staining Mehtod	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size (pixels)	1200x1600
Resolution (ppi)	72
magnification	400

Person	Koji Yamanegi
E-mail	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Address	1-1, Mukogawa, Nishinomiya, Hyogo

	Cell	Nucleus		Nucleus/Cell
Area	355.5	1449	Area ratio	4.07595
Circularity	0.599471	0.482275	Eccentricity1	0.427094
Convex area	409	1782	Eccentricity2	0.166824
Bending energy	0.676056	1.55556	Eccentricity3	0.172554
Elliptic long axis	34.9528	57.5149	Eccentricity3	0.172554
Inertia moment	31387.9	419351	Eccentricity4	0.101382

SHOGoiN Cell Taxonomy

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Anatomy:tissue 5-1	Anatomy:tissue 5-2	Anatomy:tissue 5-3	Anatomy:tissue 5-4	Cell Type	Synonym	CL Id	UBERON Id	Image Id	Tissue Image ID
1	4 Mesodermal	4 Terminally differentiated	6 Fetus 7 Postnatal 8 Neonatal 9 Infant 10 Juvenile 11 Adult	1030005010100000000000	258	Head	Eye		Eyeball	Fibrous tunica	Sclera						Vascular endothelial cell		CL:0002139		911, 912, 913, 914, 915, 921, 922, 923, 924, 925

Image

SHOGoiN Cell Id	1030005010100000000000-258	1030005010100000000000-258	1030005010100000000000-258	1030005010100000000000-258	1030005010100000000000-258	1030005010100000000000-258	1030005010100000000000-258	1030005010100000000000-258	1030005010100000000000-258	1030005010100000000000-258
Image Id	911	912	913	914	915	921	922	923	924	925
Tissue	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball
Cell Type	Vascular endothelial cell	Vascular endothelial cell	Vascular endothelial cell	Vascular endothelial cell	Vascular endothelial cell	Vascular endothelial cell	Vascular endothelial cell	Vascular endothelial cell	Vascular endothelial cell	Vascular endothelial cell
Organism	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human
Cell Strain
Location	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball
Karyotype
Race	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese
Age	65	65	65	65	65	65	65	65	65	65
Sex	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma
Cod
Shooting Date	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24
Shooting Condition
Embedding	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin
Staining	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin
Microscope	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50
Camera	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20
Image Size X	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600
Image Size Y	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200
Resolution	72	72	72	72	72	72	72	72	72	72
Magnification	400	400	400	400	400	400	400	400	400	400
Contact Person	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432
Fax	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan
Note
Nucleous Area	2012.5	1400	1215.5	1082.5	1071	1790.5	708	1276.5	1449	1953.5
Nucleous Circularity	0.537588	0.43847	0.431862	0.441966	0.326153	0.40327	0.429764	0.502828	0.482275	0.381939
Nucleous Bending	4.63784	1.95238	2.80255	2.72848	5.21176	1.31343	3.79032	2.56774	1.55556	3.08837
Nucleous Convex Area	2297	1795	1465	1362	1425	2485	913	1603	1782	2563
Nucleous Ellipse Long Axis	67.0239	51.5356	58.6749	54.2049	54.73	69.3232	43.7116	52.7138	57.5149	71.7199
Nucleous Inertia	776717	363199	313102	259530	239778	762070	104658	316478	419351	859603
Cell Area	276	395.5	349.5	294	276.5	488.5	248.5	385.5	355.5	418.5
Cell Circularity	0.848319	0.570988	0.47532	0.483037	0.482389	0.533218	0.557084	0.641941	0.599471	0.574951
Cell Bending	1.40741	0.465753	0.426667	2.85	1.68831	0.597701	1.97015	1.56962	0.676056	1.74026
Cell Convex Area	309	436	403	355	329	555	297	434	409	468
Cell Ellipse Long Axis	22.0506	41.3261	45.3001	38.9807	36.503	44.8237	30.716	37.3376	34.9528	39.7768
Cell Inertia	12918.9	45424.6	45375.6	29581.8	24758.6	68508.7	16905.4	36969	31387.9	47466.5
Cell-nucleous Area Ratio	7.29167	3.53982	3.47783	3.68197	3.87342	3.6653	2.84909	3.31128	4.07595	4.66786
Cell-nucleous Eccentricity1	1.16048	0.326638	0.422882	0.368647	0.496082	0.347151	0.282974	0.41926	0.427094	0.265016
Cell-nucleous Eccentricity2	0.847211	0.0997701	0.0936563	0.0924957	0.136975	0.111548	0.0976688	0.151506	0.166824	0.0906446
Cell-nucleous Eccentricity3	0.477174	0.114318	0.156794	0.138083	0.187269	0.142695	0.13733	0.175981	0.172554	0.100184
Cell-nucleous Eccentricity4	0.27873	0.080005	0.0723076	0.0665171	0.0913576	0.0721259	0.0686317	0.107313	0.101382	0.0502727