Image : Cell Image ID 946

No.

SHOGoiN cell id

Image (Image ID)

Title

Sample

Method

Contact

Morphologic Feature

Note

1030005040200020000000-259

946

Eyeball:Ciliary muscle cell:Human

Location	Eyeball
Age	65
Sex	Female
Race	Japanese
Disease	Orbital sebaceous carcinoma
Cause Of Death	-
Date	2014.02.24
Condition

Embedding Mehtod	Paraffin
Staining Mehtod	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size (pixels)	1200x1600
Resolution (ppi)	72
magnification	400

Person	Koji Yamanegi
E-mail	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Address	1-1, Mukogawa, Nishinomiya, Hyogo

	Cell	Nucleus		Nucleus/Cell
Area	886.5	2335.5	Area ratio	2.63452
Circularity	0.621117	0.351103	Eccentricity1	0.249946
Convex area	964	2864	Eccentricity2	0.0866637
Bending energy	1.36449	4.27615	Eccentricity3	0.133367
Elliptic long axis	57.6943	79.9092	Eccentricity3	0.133367
Inertia moment	204088	1.20E+06	Eccentricity4	0.062571

SHOGoiN Cell Taxonomy

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Anatomy:tissue 5-1	Anatomy:tissue 5-2	Anatomy:tissue 5-3	Anatomy:tissue 5-4	Cell Type	Synonym	CL Id	UBERON Id	Image Id	Tissue Image ID
1	2 Ectodermal	4 Terminally differentiated	6 Fetus 7 Postnatal 8 Neonatal 9 Infant 10 Juvenile 11 Adult	1030005040200020000000	259	Head	Eye		Eyeball	Uvea (tunica vasculosa bulbi)	Ciliary body		Ciliary muscle				Ciliary muscle cell		CL:1000443		926, 927, 928, 929, 930, 931, 932, 933, 934, 935, 940, 941, 942, 943, 944, 945, 946, 947, 948, 949

SHOGoiN Cell Marker

Cell Type Name	Ciliary muscle cell
Cell Type Subclass
SHOGoiN Cell Id	1030005040200020000000-259
Anatomical Location	Eye, ciliary body
Marker Molecule:name	Podoplanin (Aggrus, Glycoprotein 36, Gp36, PA2.26 antigen, T1-alpha, T1A, Pdpn, PDPN, GP36)
Marker Molecule:type	Protein
Marker Molecule:category
Subcellular Localization	Plasma membrane
Uniprot Id	Q86YL7
Gene Id	10630
Source Organism	Human
Reference	PMID:19737877

Image

SHOGoiN Cell Id	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259	1030005040200020000000-259
Image Id	926	927	928	929	930	931	932	933	934	935	940	941	942	943	944	945	946	947	948	949
Tissue	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball
Cell Type	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell	Ciliary muscle cell
Organism	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human
Cell Strain
Location	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball
Karyotype
Race	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese
Age	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65	65
Sex	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma
Cod
Shooting Date	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24
Shooting Condition
Embedding	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin
Staining	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin
Microscope	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50
Camera	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20
Image Size X	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600
Image Size Y	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200
Resolution	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72	72
Magnification	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400	400
Contact Person	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432
Fax	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan
Note
Nucleous Area	534	1946	1601.5	1588	1491	3259.5	2900.5	2730	2530.5	2422.5	870.5	2139.5	2418	1696.5	2991.5	1286.5	2335.5	2811.5	2941	1537
Nucleous Circularity	0.468029	0.368625	0.586516	0.410618	0.448864	0.414664	0.4417	0.57639	0.481313	0.497447	0.399674	0.32914	0.388224	0.417895	0.439411	0.557647	0.351103	0.423667	0.416831	0.448674
Nucleous Bending	5.21154	5.4717	2.45161	4.08696	3.34884	2.81509	2.4721	3.82857	2.53394	2.60094	3.46099	3.64017	1.85	3.2381	1.93574	1.93103	4.27615	1.7384	3.10853	3.19318
Nucleous Convex Area	685	2435	1857	1988	1750	4057	3392	3107	2974	2825	1117	2723	2951	2087	3591	1508	2864	3727	3553	1875
Nucleous Ellipse Long Axis	41.2366	73.8075	54.8893	51.3771	57.4009	77.4389	86.018	63.7382	72.3698	76.4104	40.452	76.5184	80.4335	58.8104	90.2957	53.4884	79.9092	95.6199	85.4395	46.2183
Nucleous Inertia	71085.2	849863	450256	430333	424905	1.90E+06	1.71E+06	1.22E+06	1.16E+06	1.14E+06	130552	1.00E+06	1.24E+06	529964	1.94E+06	307725	1.20E+06	2.09E+06	1.75E+06	389783
Cell Area	185	929.5	504	498.5	435.5	1207	1230.5	932.5	872	673.5	484.5	964.5	738.5	326.5	1328.5	247	886.5	875.5	890	724.5
Cell Circularity	0.468718	0.629041	0.871372	0.85014	0.817074	0.835823	0.800856	0.883688	0.847032	0.657016	0.835686	0.610046	0.651445	0.895233	0.637378	0.779246	0.621117	0.556459	0.711257	0.787867
Cell Bending	2.41379	5.31532	1.86111	1.9726	0.637681	0.561404	1.76068	0.868687	1.02041	0.525253	0.426667	0.588235	0.366972	1.25424	0.993289	0.555556	1.36449	1.09402	1.42593	1.65591
Cell Convex Area	219	1010	549	541	478	1286	1310	991	935	743	531	1045	805	361	1441	281	964	967	959	788
Cell Ellipse Long Axis	29.4013	56.7163	27.3038	27.1792	29.6933	47.6229	52.4322	40.0378	40.1804	46.532	30.6341	61.1293	51.0822	21.8498	69.1529	24.1971	57.6943	61.7967	48.6064	37.1409
Cell Inertia	11243.4	214846	41152	40388.8	33544.2	250481	279720	144840	129834	105597	40979.5	243930	134937	17184.1	446497	11695.9	204088	222465	164037	91355.8
Cell-nucleous Area Ratio	2.88649	2.0936	3.17758	3.18556	3.42365	2.7005	2.35717	2.92761	2.90195	3.59688	1.7967	2.21825	3.2742	5.19602	2.25179	5.2085	2.63452	3.21131	3.30449	2.12146
Cell-nucleous Eccentricity1	0	0.0674159	0.084357	0.153301	0.266822	0.127443	0.170158	0.215432	0.161791	0.409335	0.069692	0.0490847	0.22772	0.0524038	0.0898998	0.0764392	0.249946	0.395593	0.181363	0.0398097
Cell-nucleous Eccentricity2	0	0.0249349	0.0732498	0.132658	0.168388	0.0865781	0.0972498	0.159927	0.111302	0.163667	0.0461647	0.0163588	0.0830552	0.045767	0.0323351	0.0413272	0.0866637	0.117807	0.0872857	0.0269245
Cell-nucleous Eccentricity3	0	0.0401595	0.0531916	0.0866672	0.142908	0.0735117	0.116182	0.115465	0.0981984	0.184891	0.0497785	0.0274703	0.107489	0.0265094	0.0523205	0.0316467	0.133367	0.173902	0.0940832	0.0228456
Cell-nucleous Eccentricity4	0	0.0191608	0.036437	0.0701782	0.0871067	0.0532434	0.0592785	0.10046	0.0617956	0.0996693	0.0349603	0.0130687	0.0527472	0.0170038	0.0247638	0.0186956	0.062571	0.0761359	0.0496566	0.0216365