Image : Cell Image ID 954

No.

SHOGoiN cell id

Image (Image ID)

Title

Sample

Method

Contact

Morphologic Feature

Note

1030005040200020000000-206

954

Eyeball:Pigment cell:Human

Location	Eyeball
Age	65
Sex	Female
Race	Japanese
Disease	Orbital sebaceous carcinoma
Cause Of Death	-
Date	2014.02.24
Condition

Embedding Mehtod	Paraffin
Staining Mehtod	Hematoxylin
Microscope	OLYMPUS DX50
Camera	OLYMPUS DP20
Image Size (pixels)	1200x1600
Resolution (ppi)	72
magnification	400

Person	Koji Yamanegi
E-mail	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432
Fax	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine
Address	1-1, Mukogawa, Nishinomiya, Hyogo

	Cell	Nucleus		Nucleus/Cell
Area	463	1031	Area ratio	2.22678
Circularity	0.744094	0.40658	Eccentricity1	0.0559905
Convex area	514	1323	Eccentricity2	0.030077
Bending energy	0.552632	2.18421	Eccentricity3	0.0404332
Elliptic long axis	33.248	55.6456	Eccentricity3	0.0404332
Inertia moment	41767.4	254659	Eccentricity4	0.0179709

SHOGoiN Cell Taxonomy

No.	Germ Layer	Differentiation State	Source Age	Anatomy Id	Cell Type Id	Anatomy:body Part	Anatomy:organ	Anatomy:sub-organ	Anatomy:tissue 1	Anatomy:tissue 2	Anatomy:tissue 3	Anatomy:tissue 4	Anatomy:tissue 5-1	Anatomy:tissue 5-2	Anatomy:tissue 5-3	Anatomy:tissue 5-4	Cell Type	Synonym	CL Id	UBERON Id	Image Id	Tissue Image ID
1	2 Ectodermal	4 Terminally differentiated	6 Fetus state 7 Postnatal state 8 Neonatal state 9 Infant state 10 Juvenile 11 Adult	1030005040200020000000	206	Head	Eye		Eyeball	Uvea (tunica vasculosa bulbi)	Ciliary body		Ciliary muscle				Pigment cell		CL:0000149		936, 937, 938, 939, 950, 951, 952, 953, 954, 955

Image

SHOGoiN Cell Id	1030005040200020000000-206	1030005040200020000000-206	1030005040200020000000-206	1030005040200020000000-206	1030005040200020000000-206	1030005040200020000000-206	1030005040200020000000-206	1030005040200020000000-206	1030005040200020000000-206	1030005040200020000000-206
Image Id	936	937	938	939	950	951	952	953	954	955
Tissue	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball
Cell Type	Pigment cell	Pigment cell	Pigment cell	Pigment cell	Pigment cell	Pigment cell	Pigment cell	Pigment cell	Pigment cell	Pigment cell
Organism	Human	Human	Human	Human	Human	Human	Human	Human	Human	Human
Cell Strain
Location	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball	Eyeball
Karyotype
Race	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese	Japanese
Age	65	65	65	65	65	65	65	65	65	65
Sex	Female	Female	Female	Female	Female	Female	Female	Female	Female	Female
Medium
Serum
Other Chemical
Feeder
Other Treatment
Culture Period
Differentiaion
Self Renewal Ability
Onocogenic Transformation
Knock Out Gene
Knock In Gene
Disease	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma	Orbital sebaceous carcinoma
Cod
Shooting Date	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24	2014.02.24
Shooting Condition
Embedding	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin	Paraffin
Staining	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin	Hematoxylin
Microscope	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50	OLYMPUS DX50
Camera	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20	OLYMPUS DP20
Image Size X	1600	1600	1600	1600	1600	1600	1600	1600	1600	1600
Image Size Y	1200	1200	1200	1200	1200	1200	1200	1200	1200	1200
Resolution	72	72	72	72	72	72	72	72	72	72
Magnification	400	400	400	400	400	400	400	400	400	400
Contact Person	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi	Koji Yamanegi
Email	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp	yamanegi@hyo-med.ac.jp
Telephone	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432	0798-45-6432
Fax	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431	0798-45-6431
Affiliation	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine	Department of clinical pathology, Hyogo collage of medicine
Zip Code	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501	663-8501
Address	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo	1-1, Mukogawa, Nishinomiya, Hyogo
Country	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan	Japan
Note
Nucleous Area	2277	3398	2450.5	1478.5	2131.5	1534	1330.5	1730.5	1031	1242
Nucleous Circularity	0.48483	0.434293	0.357915	0.368003	0.385296	0.439289	0.42978	0.35974	0.40658	0.394138
Nucleous Bending	1.5	3.20149	2.61847	3.57219	2.66968	1.86517	4.65868	3.35885	2.18421	2.76471
Nucleous Convex Area	2640	3986	3231	1857	2531	1889	1605	2280	1323	1658
Nucleous Ellipse Long Axis	90.4512	99.7277	63.3805	47.7705	76.8079	68.3899	63.0595	68.6815	55.6456	50.1513
Nucleous Inertia	1.34E+06	2.59E+06	1.04E+06	366879	990118	549363	416135	707693	254659	285725
Cell Area	774.5	689.5	870.5	862	1041.5	703.5	438.5	332	463	191.5
Cell Circularity	0.548936	0.541227	0.874542	0.888326	0.5584	0.608565	0.733588	0.833021	0.744094	0.823992
Cell Bending	0.923077	1.1453	1.41414	0.326531	0.645669	1.17117	1.34247	1.36667	0.552632	0.553191
Cell Convex Area	861	777	936	922	1137	771	485	368	514	220
Cell Ellipse Long Axis	54.4783	58.8096	37.0058	36.744	65.1756	54.1642	32.567	24.5087	33.248	19.3162
Cell Inertia	164134	151630	123818	121789	306258	137201	37662.6	18781.7	41767.4	6421.95
Cell-nucleous Area Ratio	2.93996	4.92821	2.81505	1.7152	2.04657	2.18053	3.03421	5.21235	2.22678	6.48564
Cell-nucleous Eccentricity1	0.173532	0.801662	0.074567	0.0334353	0.0476168	0.301098	0.497473	0.244452	0.0559905	0.872258
Cell-nucleous Eccentricity2	0.0580466	0.210328	0.0604247	0.0272154	0.0153432	0.09414	0.264142	0.173107	0.030077	0.571819
Cell-nucleous Eccentricity3	0.0961675	0.28042	0.0431405	0.0245788	0.027811	0.17173	0.311511	0.12796	0.0404332	0.326959
Cell-nucleous Eccentricity4	0.0349611	0.124031	0.03528	0.0209334	0.0130195	0.0745581	0.136416	0.0617727	0.0179709	0.220241