SHOGoiN Cell Methylome: Project ID SRP016010
| No. | Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||||||||||||||||||||||||||||||||||
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| Project Title | Project Description | Project Submission Date | Organization Name | Stable Contact Information | Reference Submission Status | Reference Authors | Reference Title | Reference Pubmed Id | Assay Type | Assay Factor | Sample Id | SHOGoiN Cell Id | Source Cell Type | Source Organism | Race Or Strain | Age Or Stage | Source Tissue Or Organ | Source Cell Karyotype | Cell Lineage | Organism Genetic Information | Health Status | Source Providor | Assay Technology | Assay Detection Instrumentation | Assay Detection Instrument Vendor | Assesed Material | Source Cell Format | Source Cell Preparation Method | Source Cell Identidication Method | Source Cell Treatment | Data Id | Data Type | Data Processing Method | Data Processing Software And Version | Data Normalization Method | Data Normalization Software Name And Version | Data Analytical Software And Version | Reference Sequence Source | Genome Annotation Ref | ||||||
| 1 |  GSM1015969 | 3070000080000000000000-144 | Sequence Read Archive | SRP016010 | SRP016010_M1 | Single-cell DNA methylation analysis of epimutations in mouse liver cells. | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE41379 | 14-Oct-12 | Max Planck Institute Cologne | Kemal Akman, kemal.akman@campus.lmu.de | Not published | Methylome | Single cell or pool | GSM1015969 | 3070000080000000000000-144 | Hepatocyte | Mouse | C57BL/6 | Liver | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell, dissociated | SRR580569 | Sequence | mm10 | ||||||||||||||||||
| 2 |  GSM1015970 | 3070000080000000000000-144 | Sequence Read Archive | SRP016010 | SRP016010_M2 | Single-cell DNA methylation analysis of epimutations in mouse liver cells. | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE41379 | 14-Oct-12 | Max Planck Institute Cologne | Kemal Akman, kemal.akman@campus.lmu.de | Not published | Methylome | Single cell or pool | GSM1015970 | 3070000080000000000000-144 | Hepatocyte | Mouse | C57BL/6 | Liver | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell, dissociated | SRR580570 | Sequence | mm10 | ||||||||||||||||||
| 3 |  GSM1015971 | 3070000080000000000000-144 | Sequence Read Archive | SRP016010 | SRP016010_M3 | Single-cell DNA methylation analysis of epimutations in mouse liver cells. | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE41379 | 14-Oct-12 | Max Planck Institute Cologne | Kemal Akman, kemal.akman@campus.lmu.de | Not published | Methylome | Single cell or pool | GSM1015971 | 3070000080000000000000-144 | Hepatocyte | Mouse | C57BL/6 | Liver | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell, dissociated | SRR580571 | Sequence | mm10 | ||||||||||||||||||
| 4 |  GSM1015972 | 3070000080000000000000-144 | Sequence Read Archive | SRP016010 | SRP016010_M4 | Single-cell DNA methylation analysis of epimutations in mouse liver cells. | http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE41379 | 14-Oct-12 | Max Planck Institute Cologne | Kemal Akman, kemal.akman@campus.lmu.de | Not published | Methylome | Single cell or pool | GSM1015972 | 3070000080000000000000-144 | Hepatocyte | Mouse | C57BL/6 | Liver | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell, dissociated | SRR580572 | Sequence | mm10 | ||||||||||||||||||