Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: Project ID SRP052901


No.Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleProject DescriptionProject Submission DateOrganization NameStable Contact InformationReference Submission StatusReference AuthorsReference TitleReference Pubmed IdAssay TypeAssay FactorSample IdSHOGoiN Cell IdSource Cell TypeSource OrganismRace Or StrainAge Or StageSource Tissue Or OrganSource Cell KaryotypeCell LineageOrganism Genetic InformationHealth StatusSource ProvidorAssay TechnologyAssay Detection InstrumentationAssay Detection Instrument VendorAssesed MaterialSource Cell FormatSource Cell Preparation MethodSource Cell Identidication MethodSource Cell TreatmentData IdData TypeData Processing MethodData Processing Software And VersionData Normalization MethodData Normalization Software Name And VersionData Analytical Software And VersionReference Sequence SourceGenome Annotation Ref
1

GSM1900052-1

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M1Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900052-17020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544637SequenceBismarkmm9
2

GSM1900052-2

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M2Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900052-27020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544638SequenceBismarkmm9
3

GSM1900054-1

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M3Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900054-17020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544641SequenceBismarkmm9
4

GSM1900054-2

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M4Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900054-27020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544642SequenceBismarkmm9
5

GSM1900056-1

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M5Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900056-17020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544645SequenceBismarkmm9
6

GSM1900056-2

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M6Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900056-27020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544646SequenceBismarkmm9
7

GSM1900058-1

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M7Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900058-17020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544649SequenceBismarkmm9
8

GSM1900058-2

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M8Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900058-27020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544650SequenceBismarkmm9
9

GSM1900060-1

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M9Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900060-17020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544653SequenceBismarkmm9
10

GSM1900060-2

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M10Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900060-27020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544654SequenceBismarkmm9
11

GSM1900062-1

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M11Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900062-17020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544657SequenceBismarkmm9
12

GSM1900062-2

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M12Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900062-27020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS), Trio-seqHiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544658SequenceBismarkmm9
13

GSM1900063-1

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M13Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900063-17020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS)HiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544659SequenceBismarkmm9
14

GSM1900063-2

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M14Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900063-27020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS)HiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544660SequenceBismarkmm9
15

GSM1900064-1

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M15Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900064-17020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS)HiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544661SequenceBismarkmm9
16

GSM1900064-2

7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M16Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomahttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6536428-Jan-15Peking UniversityYu HouPublishedHou Y, Guo H, Cao C, Li X et al.Single-cell triple omics sequencing reveals genetic, epigenetic, and transcriptomic heterogeneity in hepatocellular carcinomas.26902283MethylomeOmics sequencing techniqueGSM1900064-27020001000000000000000-715Embryonic stem cellMouse129SV (male)Early embryonic tissueBisulfite-Seq (RRBS)HiSeq 2500IlluminaGenomic DNASingle cell, cultured (passage: 25-30)SRR2544662SequenceBismarkmm9