SHOGoiN Cell Methylome: Project ID SRP068012
| No. | Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||||||||||||||||||||||||||||||||||
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| Project Title | Project Description | Project Submission Date | Organization Name | Stable Contact Information | Reference Submission Status | Reference Authors | Reference Title | Reference Pubmed Id | Assay Type | Assay Factor | Sample Id | SHOGoiN Cell Id | Source Cell Type | Source Organism | Race Or Strain | Age Or Stage | Source Tissue Or Organ | Source Cell Karyotype | Cell Lineage | Organism Genetic Information | Health Status | Source Providor | Assay Technology | Assay Detection Instrumentation | Assay Detection Instrument Vendor | Assesed Material | Source Cell Format | Source Cell Preparation Method | Source Cell Identidication Method | Source Cell Treatment | Data Id | Data Type | Data Processing Method | Data Processing Software And Version | Data Normalization Method | Data Normalization Software Name And Version | Data Analytical Software And Version | Reference Sequence Source | Genome Annotation Ref | ||||||
| 1 |  GSM2026493 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M1 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026493 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309834 | Sequence | mm10 | ||||||||||||||||
| 2 |  GSM2026494 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M2 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026494 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309835 | Sequence | mm10 | ||||||||||||||||
| 3 |  GSM2026495 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M3 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026495 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309836 | Sequence | mm10 | ||||||||||||||||
| 4 |  GSM2026496 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M4 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026496 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309837 | Sequence | mm10 | ||||||||||||||||
| 5 |  GSM2026497 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M5 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026497 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309838 | Sequence | mm10 | ||||||||||||||||
| 6 |  GSM2026498 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M6 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026498 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309839 | Sequence | mm10 | ||||||||||||||||
| 7 |  GSM2026499 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M7 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026499 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309840 | Sequence | mm10 | ||||||||||||||||
| 8 |  GSM2026500 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M8 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026500 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309841 | Sequence | mm10 | ||||||||||||||||
| 9 |  GSM2026501 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M9 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026501 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309842 | Sequence | mm10 | ||||||||||||||||
| 10 |  GSM2026502 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M10 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026502 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309843 | Sequence | mm10 | ||||||||||||||||
| 11 |  GSM2026503 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M11 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026503 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309844 | Sequence | mm10 | ||||||||||||||||
| 12 |  GSM2026504 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M12 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026504 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309845 | Sequence | mm10 | ||||||||||||||||
| 13 |  GSM2026505 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M13 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026505 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309846 | Sequence | mm10 | ||||||||||||||||
| 14 |  GSM2026506 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M14 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026506 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309847 | Sequence | mm10 | ||||||||||||||||
| 15 |  GSM2026507 | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M15 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE76483 | 4-Jan-16 | UCLA | Qin An, anqin314@gmail.com | Published | Hu Y, Huang K, An Q, Du G et al. | Simultaneous profiling of transcriptome and DNA methylome from a single cell. | 27150361 | Methylome | GSM2026507 | 3150201000000000000000-189 | Neuron (Dorsal root ganglion) | Mouse | B6D2F1 | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Illumina | Genomic DNA | Single cell | SRR3309848 | Sequence | mm10 | ||||||||||||||||