SHOGoiN Cell Methylome: GSM1015969
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1015969 Profile download | 3070000080000000000000-144 | Sequence Read Archive | SRP016010 | SRP016010_M1 | Single-cell DNA methylation analysis of epimutations in mouse liver cells. | Methylome | Hepatocyte | Mouse | Liver | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000018995 | Nars2 | asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) | 6.6582 | 0.0000 |
| 2 | ENSMUSG00000100027 | Gm28477 | predicted gene 28477 | 5.9069 | 0.0000 |
| 3 | ENSMUSG00000038594 | Cep85l | centrosomal protein 85-like | 5.6147 | 0.0000 |
| 4 | ENSMUSG00000028792 | Ak2 | adenylate kinase 2 | 4.7004 | 0.0000 |
| 5 | ENSMUSG00000022803 | Popdc2 | popeye domain containing 2 | 4.6084 | 0.0000 |
| 6 | ENSMUSG00000098178 | Gm42418 | predicted gene, 42418 | 4.5795 | 0.0000 |
| 7 | ENSMUSG00000082652 | Gm14725 | predicted gene 14725 | 4.4594 | 0.0000 |
| 8 | ENSMUSG00000027438 | Napb | N-ethylmaleimide sensitive fusion protein attachment protein beta | 4.3219 | 0.0000 |
| 9 | ENSMUSG00000105151 | Gm43241 | predicted gene 43241 | 4.2479 | 0.0000 |
| 10 | ENSMUSG00000107681 | 4930528H21Rik | RIKEN cDNA 4930528H21 gene | 4.2479 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000026853 | Crat | carnitine acetyltransferase | -1.6149 | 0.0002 |
| 50853 | ENSMUSG00000026930 | Gpsm1 | G-protein signalling modulator 1 (AGS3-like, C. elegans) | -1.6025 | 0.0078 |
| 50852 | ENSMUSG00000112870 | Gm40689 | predicted gene, 40689 | -1.5850 | 0.5000 |
| 50851 | ENSMUSG00000112846 | 4930432O09Rik | RIKEN cDNA 4930432O09 gene | -1.5850 | 0.5000 |
| 50850 | ENSMUSG00000112538 | Gm47667 | predicted gene, 47667 | -1.5850 | 0.2188 |
| 50849 | ENSMUSG00000112439 | Gm33336 | predicted gene, 33336 | -1.5850 | 0.2188 |
| 50848 | ENSMUSG00000112412 | Gm35239 | predicted gene, 35239 | -1.5850 | 0.5000 |
| 50847 | ENSMUSG00000112256 | Gm48077 | predicted gene, 48077 | -1.5850 | 0.5000 |
| 50846 | ENSMUSG00000112146 | Gm46210 | predicted gene, 46210 | -1.5850 | 0.5000 |
| 50845 | ENSMUSG00000112091 | Gm47787 | predicted gene, 47787 | -1.5850 | 0.5000 |
