Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1015969

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1015969 Profile download	3070000080000000000000-144	Sequence Read Archive	SRP016010	SRP016010_M1	Single-cell DNA methylation analysis of epimutations in mouse liver cells.	Methylome	Hepatocyte	Mouse	Liver	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000018995	Nars2	asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)	6.6582	0.0000
2	ENSMUSG00000100027	Gm28477	predicted gene 28477	5.9069	0.0000
3	ENSMUSG00000038594	Cep85l	centrosomal protein 85-like	5.6147	0.0000
4	ENSMUSG00000028792	Ak2	adenylate kinase 2	4.7004	0.0000
5	ENSMUSG00000022803	Popdc2	popeye domain containing 2	4.6084	0.0000
7	ENSMUSG00000082652	Gm14725	predicted gene 14725	4.4594	0.0000
8	ENSMUSG00000027438	Napb	N-ethylmaleimide sensitive fusion protein attachment protein beta	4.3219	0.0000
9	ENSMUSG00000105151	Gm43241	predicted gene 43241	4.2479	0.0000
10	ENSMUSG00000107681	4930528H21Rik	RIKEN cDNA 4930528H21 gene	4.2479	0.0000
47072	ENSMUSG00000000739	Sult5a1	sulfotransferase family 5A, member 1	-1.0000	1.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000001168	Oas1h	2'-5' oligoadenylate synthetase 1H	-1.0000	1.0000
47080	ENSMUSG00000001155	Ftcd	formiminotransferase cyclodeaminase	-1.0000	1.0000
47079	ENSMUSG00000001143	Lman2l	lectin, mannose-binding 2-like	-1.0000	1.0000
47078	ENSMUSG00000001119	Col6a1	collagen, type VI, alpha 1	-1.0000	1.0000
47077	ENSMUSG00000001103	Sebox	SEBOX homeobox	-1.0000	0.5000
47076	ENSMUSG00000001100	Poldip2	polymerase (DNA-directed), delta interacting protein 2	-1.0000	1.0000
47075	ENSMUSG00000001036	Epn2	epsin 2	-1.0000	1.0000
47074	ENSMUSG00000000915	Hip1r	huntingtin interacting protein 1 related	-1.0000	1.0000
47073	ENSMUSG00000000776	Polr3d	polymerase (RNA) III (DNA directed) polypeptide D	-1.0000	1.0000
47072	ENSMUSG00000000739	Sult5a1	sulfotransferase family 5A, member 1	-1.0000	1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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