Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1015969

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015969


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3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M1Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000018995 Nars2 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) 6.6582 0.0000
2 ENSMUSG00000100027 Gm28477 predicted gene 28477 5.9069 0.0000
3 ENSMUSG00000038594 Cep85l centrosomal protein 85-like 5.6147 0.0000
4 ENSMUSG00000028792 Ak2 adenylate kinase 2 4.7004 0.0000
5 ENSMUSG00000022803 Popdc2 popeye domain containing 2 4.6084 0.0000
7 ENSMUSG00000082652 Gm14725 predicted gene 14725 4.4594 0.0000
8 ENSMUSG00000027438 Napb N-ethylmaleimide sensitive fusion protein attachment protein beta 4.3219 0.0000
9 ENSMUSG00000105151 Gm43241 predicted gene 43241 4.2479 0.0000
10 ENSMUSG00000107681 4930528H21Rik RIKEN cDNA 4930528H21 gene 4.2479 0.0000
47072 ENSMUSG00000000739 Sult5a1 sulfotransferase family 5A, member 1 -1.0000 1.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000001168 Oas1h 2'-5' oligoadenylate synthetase 1H -1.0000 1.0000
47080 ENSMUSG00000001155 Ftcd formiminotransferase cyclodeaminase -1.0000 1.0000
47079 ENSMUSG00000001143 Lman2l lectin, mannose-binding 2-like -1.0000 1.0000
47078 ENSMUSG00000001119 Col6a1 collagen, type VI, alpha 1 -1.0000 1.0000
47077 ENSMUSG00000001103 Sebox SEBOX homeobox -1.0000 0.5000
47076 ENSMUSG00000001100 Poldip2 polymerase (DNA-directed), delta interacting protein 2 -1.0000 1.0000
47075 ENSMUSG00000001036 Epn2 epsin 2 -1.0000 1.0000
47074 ENSMUSG00000000915 Hip1r huntingtin interacting protein 1 related -1.0000 1.0000
47073 ENSMUSG00000000776 Polr3d polymerase (RNA) III (DNA directed) polypeptide D -1.0000 1.0000
47072 ENSMUSG00000000739 Sult5a1 sulfotransferase family 5A, member 1 -1.0000 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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