Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Methylome: GSM1015969
Methylation Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1015969
Profile download
3070000080000000000000-144
Sequence Read Archive
SRP016010
SRP016010_M1
Single-cell DNA methylation analysis of epimutations in mouse liver cells.
Methylome
Hepatocyte
Mouse
Liver
Bisulfite-Seq (RRBS)
HiSeq 2000
Sequence
Histogram (P-value of methylation rate)
Top 10 methylated genes
Rank
ENSG
Gene symbol
Description
M-value
P-vaue
1
ENSMUSG00000018995
Nars2
asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
6.6582
0.0000
2
ENSMUSG00000100027
Gm28477
predicted gene 28477
5.9069
0.0000
3
ENSMUSG00000038594
Cep85l
centrosomal protein 85-like
5.6147
0.0000
4
ENSMUSG00000028792
Ak2
adenylate kinase 2
4.7004
0.0000
5
ENSMUSG00000022803
Popdc2
popeye domain containing 2
4.6084
0.0000
7
ENSMUSG00000082652
Gm14725
predicted gene 14725
4.4594
0.0000
8
ENSMUSG00000027438
Napb
N-ethylmaleimide sensitive fusion protein attachment protein beta
4.3219
0.0000
9
ENSMUSG00000105151
Gm43241
predicted gene 43241
4.2479
0.0000
10
ENSMUSG00000107681
4930528H21Rik
RIKEN cDNA 4930528H21 gene
4.2479
0.0000
47072
ENSMUSG00000000739
Sult5a1
sulfotransferase family 5A, member 1
-1.0000
1.0000
Bottom 10 methylated genes
Rank
ENSG
Gene symbol
Description
M-value
P-value
47081
ENSMUSG00000001168
Oas1h
2'-5' oligoadenylate synthetase 1H
-1.0000
1.0000
47080
ENSMUSG00000001155
Ftcd
formiminotransferase cyclodeaminase
-1.0000
1.0000
47079
ENSMUSG00000001143
Lman2l
lectin, mannose-binding 2-like
-1.0000
1.0000
47078
ENSMUSG00000001119
Col6a1
collagen, type VI, alpha 1
-1.0000
1.0000
47077
ENSMUSG00000001103
Sebox
SEBOX homeobox
-1.0000
0.5000
47076
ENSMUSG00000001100
Poldip2
polymerase (DNA-directed), delta interacting protein 2
-1.0000
1.0000
47075
ENSMUSG00000001036
Epn2
epsin 2
-1.0000
1.0000
47074
ENSMUSG00000000915
Hip1r
huntingtin interacting protein 1 related
-1.0000
1.0000
47073
ENSMUSG00000000776
Polr3d
polymerase (RNA) III (DNA directed) polypeptide D
-1.0000
1.0000
47072
ENSMUSG00000000739
Sult5a1
sulfotransferase family 5A, member 1
-1.0000
1.0000
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
M-value
P-value
full
download
Now loading...