SHOGoiN Cell Methylome: GSM1015969
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1015969 Profile download | 3070000080000000000000-144 | Sequence Read Archive | SRP016010 | SRP016010_M1 | Single-cell DNA methylation analysis of epimutations in mouse liver cells. | Methylome | Hepatocyte | Mouse | Liver | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000018995 | Nars2 | Probable asparagine--tRNA ligase, mitochondrial | 6.6582 | 0.0000 |
| 2 | ENSMUSG00000100027 | Gm28477 | predicted gene 28477 | 5.9069 | 0.0000 |
| 3 | ENSMUSG00000038594 | Cep85l | centrosomal protein 85-like | 5.6147 | 0.0000 |
| 4 | ENSMUSG00000028792 | Ak2 | Adenylate kinase 2, mitochondrial | 4.7004 | 0.0000 |
| 5 | ENSMUSG00000022803 | Popdc2 | Popeye domain-containing protein 2 | 4.6084 | 0.0000 |
| 6 | ENSMUSG00000098178 | Gm42418 | predicted gene, 42418 | 4.5795 | 0.0000 |
| 7 | ENSMUSG00000082652 | Gm14725 | predicted gene 14725 | 4.4594 | 0.0000 |
| 8 | ENSMUSG00000027438 | Napb | Beta-soluble NSF attachment protein | 4.3219 | 0.0000 |
| 9 | ENSMUSG00000105151 | Gm43241 | predicted gene 43241 | 4.2479 | 0.0000 |
| 10 | ENSMUSG00000107681 | 4930528H21Rik | RIKEN cDNA 4930528H21 gene | 4.2479 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50998 | ENSMUSG00000054580 | Pla2r1 | Secretory phospholipase A2 receptor Soluble secretory phospholipase A2 receptor | -2.3219 | 0.1250 |
| 50997 | ENSMUSG00000050737 | Ptges | Prostaglandin E synthase | -2.3219 | 0.1250 |
| 50996 | ENSMUSG00000046585 | Cfap58 | Cilia- and flagella-associated protein 58 | -2.3219 | 0.1250 |
| 50995 | ENSMUSG00000045374 | Wdr81 | WD repeat domain 81 | -2.3219 | 0.0078 |
| 50994 | ENSMUSG00000044350 | Lacc1 | Laccase domain-containing protein 1 | -2.3219 | 0.1250 |
| 50993 | ENSMUSG00000040029 | Ipo8 | Importin-8 | -2.3219 | 0.1250 |
| 50992 | ENSMUSG00000038462 | Uqcrfs1 | ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 | -2.3219 | 0.1250 |
| 50991 | ENSMUSG00000036432 | Siah2 | siah E3 ubiquitin protein ligase 2 | -2.3219 | 0.1250 |
| 50990 | ENSMUSG00000035206 | Sppl2b | Signal peptide peptidase-like 2B | -2.3219 | 0.1250 |
| 50989 | ENSMUSG00000034795 | Ccdc122 | Coiled-coil domain-containing protein 122 | -2.3219 | 0.1250 |
