SHOGoiN Cell Methylome: GSM1015969

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015969


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3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M1Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000018995 Nars2 asparaginyl-tRNA synthetase 2 (mitochondrial)(putative) 6.6582 0.0000
2 ENSMUSG00000100027 Gm28477 predicted gene 28477 5.9069 0.0000
3 ENSMUSG00000038594 Cep85l centrosomal protein 85-like 5.6147 0.0000
4 ENSMUSG00000028792 Ak2 adenylate kinase 2 4.7004 0.0000
5 ENSMUSG00000022803 Popdc2 popeye domain containing 2 4.6084 0.0000
6 ENSMUSG00000098178 Gm42418 predicted gene, 42418 4.5795 0.0000
7 ENSMUSG00000082652 Gm14725 predicted gene 14725 4.4594 0.0000
8 ENSMUSG00000027438 Napb N-ethylmaleimide sensitive fusion protein attachment protein beta 4.3219 0.0000
9 ENSMUSG00000105151 Gm43241 predicted gene 43241 4.2479 0.0000
10 ENSMUSG00000107681 4930528H21Rik RIKEN cDNA 4930528H21 gene 4.2479 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000026853 Crat carnitine acetyltransferase -1.6149 0.0002
50853 ENSMUSG00000026930 Gpsm1 G-protein signalling modulator 1 (AGS3-like, C. elegans) -1.6025 0.0078
50852 ENSMUSG00000112870 Gm40689 predicted gene, 40689 -1.5850 0.5000
50851 ENSMUSG00000112846 4930432O09Rik RIKEN cDNA 4930432O09 gene -1.5850 0.5000
50850 ENSMUSG00000112538 Gm47667 predicted gene, 47667 -1.5850 0.2188
50849 ENSMUSG00000112439 Gm33336 predicted gene, 33336 -1.5850 0.2188
50848 ENSMUSG00000112412 Gm35239 predicted gene, 35239 -1.5850 0.5000
50847 ENSMUSG00000112256 Gm48077 predicted gene, 48077 -1.5850 0.5000
50846 ENSMUSG00000112146 Gm46210 predicted gene, 46210 -1.5850 0.5000
50845 ENSMUSG00000112091 Gm47787 predicted gene, 47787 -1.5850 0.5000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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