SHOGoiN Cell Methylome: GSM1015970

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015970


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3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M2Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000022951 Rcan1 regulator of calcineurin 1 10.6147 0.0000
2 ENSMUSG00000031201 Brcc3 BRCA1/BRCA2-containing complex, subunit 3 6.7814 0.0000
3 ENSMUSG00000069785 Gm11444 predicted gene 11444 6.7279 0.0000
4 ENSMUSG00000026278 Bok BCL2-related ovarian killer 6.6273 0.0000
5 ENSMUSG00000001349 Cnn1 calponin 1 6.2738 0.0000
6 ENSMUSG00000103194 Gm37643 predicted gene, 37643 6.2577 0.0000
7 ENSMUSG00000098137 Gm33962 predicted gene, 33962 6.1085 0.0000
8 ENSMUSG00000039989 Cbx4 chromobox 4 6.0444 0.0000
9 ENSMUSG00000097614 Gm26508 predicted gene, 26508 6.0444 0.0000
10 ENSMUSG00000062105 Olfr183 olfactory receptor 183 5.8071 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000078651 Aoc2 amine oxidase, copper containing 2 (retina-specific) -1.5850 0.1654
50853 ENSMUSG00000077786 Gm23909 predicted gene, 23909 -1.5850 0.1654
50852 ENSMUSG00000077643 Gm24985 predicted gene, 24985 -1.5850 0.1654
50851 ENSMUSG00000077459 Gm25919 predicted gene, 25919 -1.5850 0.1654
50850 ENSMUSG00000077383 Gm22659 predicted gene, 22659 -1.5850 0.1654
50849 ENSMUSG00000075437 Gm11681 predicted gene 11681 -1.5850 0.1654
50848 ENSMUSG00000075419 Dolk dolichol kinase -1.5850 0.1654
50847 ENSMUSG00000074987 Wt1os Wilms tumor 1 homolog, opposite strand -1.5850 0.1654
50846 ENSMUSG00000071392 Ect2l epithelial cell transforming sequence 2 oncogene-like -1.5850 0.1654
50845 ENSMUSG00000070733 Fryl FRY like transcription coactivator -1.5850 0.1654

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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