Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1015972

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1015972 Profile download	3070000080000000000000-144	Sequence Read Archive	SRP016010	SRP016010_M4	Single-cell DNA methylation analysis of epimutations in mouse liver cells.	Methylome	Hepatocyte	Mouse	Liver	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000064289	Tank	TRAF family member-associated Nf-kappa B activator	6.3399	0.0000
2	ENSMUSG00000029028	Lrrc47	leucine rich repeat containing 47	5.4798	0.0000
3	ENSMUSG00000083241	Gm13259	predicted gene 13259	5.3923	0.0000
4	ENSMUSG00000069085	Dytn	dystrotelin	5.0018	0.0000
5	ENSMUSG00000105151	Gm43241	predicted gene 43241	4.8074	0.0002
6	ENSMUSG00000037535	1700021A07Rik	RIKEN cDNA 1700021A07 gene	4.6147	0.0000
7	ENSMUSG00000105055	Gm43079	predicted gene 43079	4.5236	0.0007
8	ENSMUSG00000086203	Gm13985	predicted gene 13985	4.3219	0.0019
9	ENSMUSG00000022905	Kpna1	karyopherin (importin) alpha 1	4.2089	0.0000
10	ENSMUSG00000086324	Gm15564	predicted gene 15564	4.2089	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000110217	Gm45408	predicted gene 45408	0.0000	1.0000
47080	ENSMUSG00000110216	Gm36325	predicted gene, 36325	0.0000	1.0000
47079	ENSMUSG00000110215	Gm45598	predicted gene 45598	0.0000	1.0000
47078	ENSMUSG00000110214	Gm45587	predicted gene 45587	0.0000	1.0000
47077	ENSMUSG00000110213	Gm45628	predicted gene 45628	0.0000	1.0000
47076	ENSMUSG00000110212	Gm35963	predicted gene, 35963	0.0000	1.0000
47075	ENSMUSG00000110211	Gm31294	predicted gene, 31294	0.0000	1.0000
47074	ENSMUSG00000110210	Gm33756	predicted gene, 33756	0.0000	1.0000
47073	ENSMUSG00000110209	Gm45868	predicted gene 45868	0.0000	1.0000
47072	ENSMUSG00000110208	Gm45442	predicted gene 45442	0.0000	1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

Now loading...