SHOGoiN Cell Methylome: GSM1015972

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015972


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3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M4Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000064289 Tank TRAF family member-associated Nf-kappa B activator 6.3399 0.0000
2 ENSMUSG00000029028 Lrrc47 leucine rich repeat containing 47 5.4798 0.0000
3 ENSMUSG00000083241 Gm13259 predicted gene 13259 5.3923 0.0000
4 ENSMUSG00000069085 Dytn dystrotelin 5.0018 0.0000
5 ENSMUSG00000105151 Gm43241 predicted gene 43241 4.8074 0.0002
6 ENSMUSG00000037535 1700021A07Rik RIKEN cDNA 1700021A07 gene 4.6147 0.0000
7 ENSMUSG00000105055 Gm43079 predicted gene 43079 4.5236 0.0007
8 ENSMUSG00000086203 Gm13985 predicted gene 13985 4.3219 0.0019
9 ENSMUSG00000022905 Kpna1 karyopherin (importin) alpha 1 4.2089 0.0000
10 ENSMUSG00000086324 Gm15564 predicted gene 15564 4.2089 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000109998 Gm45437 predicted gene 45437 -1.0000 0.2933
50853 ENSMUSG00000109957 Gm45353 predicted gene 45353 -1.0000 0.0860
50852 ENSMUSG00000109935 Gm7619 predicted gene 7619 -1.0000 0.2933
50851 ENSMUSG00000109876 Gm45449 predicted gene 45449 -1.0000 0.2933
50850 ENSMUSG00000109816 4930483O08Rik RIKEN cDNA 4930483O08 gene -1.0000 0.0252
50849 ENSMUSG00000109746 Gm7499 predicted gene 7499 -1.0000 0.2933
50848 ENSMUSG00000109703 Gm45299 predicted gene 45299 -1.0000 0.2933
50847 ENSMUSG00000109693 Gm45483 predicted gene 45483 -1.0000 0.2933
50846 ENSMUSG00000109635 Gm45670 predicted gene 45670 -1.0000 0.2933
50845 ENSMUSG00000109545 Gm44788 predicted gene 44788 -1.0000 0.2933

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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