Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1015972

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1015972


Profile download
3070000080000000000000-144Sequence Read ArchiveSRP016010SRP016010_M4Single-cell DNA methylation analysis of epimutations in mouse liver cells.MethylomeHepatocyteMouseLiverBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000064289 Tank TRAF family member-associated Nf-kappa B activator 6.3399 0.0000
2 ENSMUSG00000029028 Lrrc47 leucine rich repeat containing 47 5.4798 0.0000
3 ENSMUSG00000083241 Gm13259 predicted gene 13259 5.3923 0.0000
4 ENSMUSG00000069085 Dytn dystrotelin 5.0018 0.0000
5 ENSMUSG00000105151 Gm43241 predicted gene 43241 4.8074 0.0002
6 ENSMUSG00000037535 1700021A07Rik RIKEN cDNA 1700021A07 gene 4.6147 0.0000
7 ENSMUSG00000105055 Gm43079 predicted gene 43079 4.5236 0.0007
8 ENSMUSG00000086203 Gm13985 predicted gene 13985 4.3219 0.0019
9 ENSMUSG00000022905 Kpna1 karyopherin (importin) alpha 1 4.2089 0.0000
10 ENSMUSG00000086324 Gm15564 predicted gene 15564 4.2089 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000110217 Gm45408 predicted gene 45408 0.0000 1.0000
47080 ENSMUSG00000110216 Gm36325 predicted gene, 36325 0.0000 1.0000
47079 ENSMUSG00000110215 Gm45598 predicted gene 45598 0.0000 1.0000
47078 ENSMUSG00000110214 Gm45587 predicted gene 45587 0.0000 1.0000
47077 ENSMUSG00000110213 Gm45628 predicted gene 45628 0.0000 1.0000
47076 ENSMUSG00000110212 Gm35963 predicted gene, 35963 0.0000 1.0000
47075 ENSMUSG00000110211 Gm31294 predicted gene, 31294 0.0000 1.0000
47074 ENSMUSG00000110210 Gm33756 predicted gene, 33756 0.0000 1.0000
47073 ENSMUSG00000110209 Gm45868 predicted gene 45868 0.0000 1.0000
47072 ENSMUSG00000110208 Gm45442 predicted gene 45442 0.0000 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...