SHOGoiN Cell Methylome: GSM1015972
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1015972 Profile download | 3070000080000000000000-144 | Sequence Read Archive | SRP016010 | SRP016010_M4 | Single-cell DNA methylation analysis of epimutations in mouse liver cells. | Methylome | Hepatocyte | Mouse | Liver | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000064289 | Tank | TRAF family member-associated Nf-kappa B activator | 6.3399 | 0.0000 |
| 2 | ENSMUSG00000029028 | Lrrc47 | leucine rich repeat containing 47 | 5.4798 | 0.0000 |
| 3 | ENSMUSG00000083241 | Gm13259 | predicted gene 13259 | 5.3923 | 0.0000 |
| 4 | ENSMUSG00000069085 | Dytn | dystrotelin | 5.0018 | 0.0000 |
| 5 | ENSMUSG00000105151 | Gm43241 | predicted gene 43241 | 4.8074 | 0.0002 |
| 6 | ENSMUSG00000037535 | 1700021A07Rik | RIKEN cDNA 1700021A07 gene | 4.6147 | 0.0000 |
| 7 | ENSMUSG00000105055 | Gm43079 | predicted gene 43079 | 4.5236 | 0.0007 |
| 8 | ENSMUSG00000086203 | Gm13985 | predicted gene 13985 | 4.3219 | 0.0019 |
| 9 | ENSMUSG00000022905 | Kpna1 | karyopherin (importin) alpha 1 | 4.2089 | 0.0000 |
| 10 | ENSMUSG00000086324 | Gm15564 | predicted gene 15564 | 4.2089 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000109998 | Gm45437 | predicted gene 45437 | -1.0000 | 0.2933 |
| 50853 | ENSMUSG00000109957 | Gm45353 | predicted gene 45353 | -1.0000 | 0.0860 |
| 50852 | ENSMUSG00000109935 | Gm7619 | predicted gene 7619 | -1.0000 | 0.2933 |
| 50851 | ENSMUSG00000109876 | Gm45449 | predicted gene 45449 | -1.0000 | 0.2933 |
| 50850 | ENSMUSG00000109816 | 4930483O08Rik | RIKEN cDNA 4930483O08 gene | -1.0000 | 0.0252 |
| 50849 | ENSMUSG00000109746 | Gm7499 | predicted gene 7499 | -1.0000 | 0.2933 |
| 50848 | ENSMUSG00000109703 | Gm45299 | predicted gene 45299 | -1.0000 | 0.2933 |
| 50847 | ENSMUSG00000109693 | Gm45483 | predicted gene 45483 | -1.0000 | 0.2933 |
| 50846 | ENSMUSG00000109635 | Gm45670 | predicted gene 45670 | -1.0000 | 0.2933 |
| 50845 | ENSMUSG00000109545 | Gm44788 | predicted gene 44788 | -1.0000 | 0.2933 |
