SHOGoiN Cell Methylome: GSM1147582

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147582


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7020001000000000000000-715Sequence Read ArchiveSRP023116SRP023116_M3Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000082286 Pisd-ps1 phosphatidylserine decarboxylase, pseudogene 1 8.4757 0.0000
2 ENSMUSG00000102862 Gm37640 predicted gene, 37640 8.3129 0.0000
3 ENSMUSG00000112886 Gm18339 predicted gene, 18339 7.9542 0.0000
5 ENSMUSG00000098842 Gm27907 predicted gene, 27907 7.6401 0.0000
6 ENSMUSG00000093665 Obox3-ps1 oocyte specific homeobox 3, pseudogene 1 7.4346 0.0000
7 ENSMUSG00000100789 Gm29508 predicted gene 29508 7.3428 0.0000
8 ENSMUSG00000023013 Aqp2 aquaporin 2 7.1997 0.0000
9 ENSMUSG00000077647 Gm24981 predicted gene, 24981 7.1997 0.0000
10 ENSMUSG00000067610 Klri1 killer cell lectin-like receptor family I member 1 7.1898 0.0000
50845 ENSMUSG00000064925 Snora62 small nucleolar RNA, H/ACA box 62 -6.2515 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000084145 Gm12263 predicted gene 12263 -6.2641 0.0000
50853 ENSMUSG00000083234 Gm12262 predicted gene 12262 -6.2641 0.0000
50852 ENSMUSG00000054519 Zfp867 zinc finger protein 867 -6.2641 0.0000
50851 ENSMUSG00000110424 1700012D14Rik RIKEN cDNA 1700012D14 gene -6.2630 0.0000
50850 ENSMUSG00000022969 Il10rb interleukin 10 receptor, beta -6.2611 0.0000
50849 ENSMUSG00000029777 Gars glycyl-tRNA synthetase -6.2609 0.0000
50848 ENSMUSG00000020085 Aifm2 apoptosis-inducing factor, mitochondrion-associated 2 -6.2589 0.0000
50847 ENSMUSG00000111028 Gm5922 predicted gene 5922 -6.2515 0.0000
50846 ENSMUSG00000065041 Gm24044 predicted gene, 24044 -6.2515 0.0000
50845 ENSMUSG00000064925 Snora62 small nucleolar RNA, H/ACA box 62 -6.2515 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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