SHOGoiN Cell Methylome: GSM1147582
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147582 Profile download | 7020001000000000000000-715 | Sequence Read Archive | SRP023116 | SRP023116_M3 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Embryonic stem cell | Mouse | Early embryonic tissue | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000082286 | Pisd-ps1 | phosphatidylserine decarboxylase, pseudogene 1 | 8.4757 | 0.0000 |
| 2 | ENSMUSG00000102862 | Gm37640 | predicted gene, 37640 | 8.3129 | 0.0000 |
| 3 | ENSMUSG00000112886 | Gm18339 | predicted gene, 18339 | 7.9542 | 0.0000 |
| 5 | ENSMUSG00000098842 | Gm27907 | predicted gene, 27907 | 7.6401 | 0.0000 |
| 6 | ENSMUSG00000093665 | Obox3-ps1 | oocyte specific homeobox 3, pseudogene 1 | 7.4346 | 0.0000 |
| 7 | ENSMUSG00000100789 | Gm29508 | predicted gene 29508 | 7.3428 | 0.0000 |
| 8 | ENSMUSG00000023013 | Aqp2 | aquaporin 2 | 7.1997 | 0.0000 |
| 9 | ENSMUSG00000077647 | Gm24981 | predicted gene, 24981 | 7.1997 | 0.0000 |
| 10 | ENSMUSG00000067610 | Klri1 | killer cell lectin-like receptor family I member 1 | 7.1898 | 0.0000 |
| 50845 | ENSMUSG00000064925 | Snora62 | small nucleolar RNA, H/ACA box 62 | -6.2515 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000084145 | Gm12263 | predicted gene 12263 | -6.2641 | 0.0000 |
| 50853 | ENSMUSG00000083234 | Gm12262 | predicted gene 12262 | -6.2641 | 0.0000 |
| 50852 | ENSMUSG00000054519 | Zfp867 | zinc finger protein 867 | -6.2641 | 0.0000 |
| 50851 | ENSMUSG00000110424 | 1700012D14Rik | RIKEN cDNA 1700012D14 gene | -6.2630 | 0.0000 |
| 50850 | ENSMUSG00000022969 | Il10rb | interleukin 10 receptor, beta | -6.2611 | 0.0000 |
| 50849 | ENSMUSG00000029777 | Gars | glycyl-tRNA synthetase | -6.2609 | 0.0000 |
| 50848 | ENSMUSG00000020085 | Aifm2 | apoptosis-inducing factor, mitochondrion-associated 2 | -6.2589 | 0.0000 |
| 50847 | ENSMUSG00000111028 | Gm5922 | predicted gene 5922 | -6.2515 | 0.0000 |
| 50846 | ENSMUSG00000065041 | Gm24044 | predicted gene, 24044 | -6.2515 | 0.0000 |
| 50845 | ENSMUSG00000064925 | Snora62 | small nucleolar RNA, H/ACA box 62 | -6.2515 | 0.0000 |
