Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147582

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1147582 Profile download	7020001000000000000000-715	Sequence Read Archive	SRP023116	SRP023116_M3	Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing	Methylome	Embryonic stem cell	Mouse	Early embryonic tissue	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000082286	Pisd-ps1	phosphatidylserine decarboxylase, pseudogene 1	8.4757	0.0000
2	ENSMUSG00000102862	Gm37640	predicted gene, 37640	8.3129	0.0000
3	ENSMUSG00000112886	Gm18339	predicted gene, 18339	7.9542	0.0000
6	ENSMUSG00000093665	Obox3-ps1	oocyte specific homeobox 3, pseudogene 1	7.4346	0.0000
7	ENSMUSG00000100789	Gm29508	predicted gene 29508	7.3428	0.0000
8	ENSMUSG00000023013	Aqp2	aquaporin 2	7.1997	0.0000
9	ENSMUSG00000077647	Gm24981	predicted gene, 24981	7.1997	0.0000
10	ENSMUSG00000067610	Klri1	killer cell lectin-like receptor family I member 1	7.1898	0.0000
47072	ENSMUSG00000045589	Frrs1l	ferric-chelate reductase 1 like	-3.9449	0.0000
47073	ENSMUSG00000102969	Gm33366	predicted gene, 33366	-3.9458	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000033904	Ccp110	centriolar coiled coil protein 110	-3.9472	0.0000
47080	ENSMUSG00000110707	Gm45795	predicted gene 45795	-3.9472	0.0000
47079	ENSMUSG00000041556	Fbxo2	F-box protein 2	-3.9463	0.0000
47078	ENSMUSG00000109899	Gm6012	predicted gene 6012	-3.9462	0.0000
47077	ENSMUSG00000054717	Hmgb2	high mobility group box 2	-3.9462	0.0000
47076	ENSMUSG00000110706	Gm45709	predicted gene 45709	-3.9461	0.0000
47075	ENSMUSG00000031986	Sprtn	SprT-like N-terminal domain	-3.9461	0.0000
47074	ENSMUSG00000035329	Fbxo33	F-box protein 33	-3.9460	0.0000
47073	ENSMUSG00000102969	Gm33366	predicted gene, 33366	-3.9458	0.0000
47072	ENSMUSG00000045589	Frrs1l	ferric-chelate reductase 1 like	-3.9449	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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