SHOGoiN Cell Methylome: GSM1147583
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147583 Profile download | 7020001000000000000000-715 | Sequence Read Archive | SRP023116 | SRP023116_M4 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Embryonic stem cell | Mouse | Early embryonic tissue | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000047502 | Mroh7 | Maestro heat-like repeat-containing protein family member 7 | 8.8281 | 0.0000 |
| 2 | ENSMUSG00000098281 | Gm27529 | predicted gene, 27529 | 8.7966 | 0.0000 |
| 3 | ENSMUSG00000086039 | Gm12227 | predicted gene 12227 | 8.4321 | 0.0000 |
| 4 | ENSMUSG00000047861 | Foxi1 | Forkhead box protein I1 | 8.4277 | 0.0000 |
| 5 | ENSMUSG00000098842 | Gm27907 | predicted gene, 27907 | 8.0590 | 0.0000 |
| 6 | ENSMUSG00000087950 | Mir1948 | microRNA 1948 | 7.9858 | 0.0000 |
| 7 | ENSMUSG00000091003 | Gm7244 | predicted gene 7244 | 7.9581 | 0.0000 |
| 8 | ENSMUSG00000077507 | Gm24235 | predicted gene, 24235 | 7.8826 | 0.0000 |
| 9 | ENSMUSG00000081152 | Gm12430 | predicted gene 12430 | 7.8765 | 0.0000 |
| 10 | ENSMUSG00000028280 | Gabrr1 | Gamma-aminobutyric acid receptor subunit rho-1 | 7.7748 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50998 | ENSMUSG00000027358 | Bmp2 | Bone morphotic protein 2 | -7.1782 | 0.0000 |
| 50997 | ENSMUSG00000069171 | Nr2f1 | nuclear receptor subfamily 2, group F, member 1 | -7.1718 | 0.0000 |
| 50996 | ENSMUSG00000093975 | Vmn2r-ps19 | vomeronasal 2, receptor, pseudogene 19 | -7.1599 | 0.0000 |
| 50995 | ENSMUSG00000082248 | Gm13161 | predicted gene 13161 | -7.1599 | 0.0000 |
| 50994 | ENSMUSG00000051397 | Tacstd2 | Tumor-associated calcium signal transducer 2 | -7.1558 | 0.0000 |
| 50993 | ENSMUSG00000032727 | Mier3 | Mesoderm induction early response protein 3 | -7.1449 | 0.0000 |
| 50992 | ENSMUSG00000037536 | Fbxo34 | F-box only protein 34 | -7.1431 | 0.0000 |
| 50991 | ENSMUSG00000106568 | Gm42814 | predicted gene 42814 | -7.1370 | 0.0000 |
| 50990 | ENSMUSG00000050144 | Slc25a44 | solute carrier family 25, member 44 | -7.1370 | 0.0000 |
| 50989 | ENSMUSG00000000811 | Txnrd3 | thioredoxin reductase 3 | -7.1216 | 0.0000 |
