SHOGoiN Cell Methylome: GSM1147584

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147584


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7020001000000000000000-715Sequence Read ArchiveSRP023116SRP023116_M5Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000087835 Gm24481 predicted gene, 24481 6.0224 0.0000
2 ENSMUSG00000006711 D130043K22Rik RIKEN cDNA D130043K22 gene 5.9542 0.0000
3 ENSMUSG00000054036 Olfr279 olfactory receptor 279 5.9307 0.0000
4 ENSMUSG00000029154 Cwh43 cell wall biogenesis 43 C-terminal homolog 5.5236 0.0000
5 ENSMUSG00000103441 7530428D23Rik RIKEN cDNA 7530428D23 gene 5.5236 0.0000
6 ENSMUSG00000089659 Gm3470 predicted gene 3470 5.4263 0.0000
7 ENSMUSG00000092409 Gm9613 predicted gene 9613 5.3576 0.0000
8 ENSMUSG00000088832 Gm23543 predicted gene, 23543 5.3557 0.0000
9 ENSMUSG00000026829 Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 5.3277 0.0000
10 ENSMUSG00000111342 4933404K13Rik RIKEN cDNA 4933404K13 gene 5.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000051391 Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide -4.4594 0.0006
50853 ENSMUSG00000049488 Tmem67 transmembrane protein 67 -4.4594 0.0000
50852 ENSMUSG00000043091 Tuba1c tubulin, alpha 1C -4.4594 0.0726
50851 ENSMUSG00000025602 Zfp202 zinc finger protein 202 -4.4594 0.0726
50850 ENSMUSG00000022636 Alcam activated leukocyte cell adhesion molecule -4.4593 0.0000
50849 ENSMUSG00000036955 Kif1bp KIF1 binding protein -4.4583 0.0000
50848 ENSMUSG00000044499 Hs3st5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -4.4576 0.0000
50847 ENSMUSG00000020859 Spag9 sperm associated antigen 9 -4.4565 0.0000
50846 ENSMUSG00000022414 Tab1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 -4.4538 0.0000
50845 ENSMUSG00000022634 Yaf2 YY1 associated factor 2 -4.4519 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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