SHOGoiN Cell Methylome: GSM1147587

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147587


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7020001000000000000000-715Sequence Read ArchiveSRP023116SRP023116_M8Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000048188 Gm8181 predicted gene 8181 7.7944 0.0000
2 ENSMUSG00000035246 Pcyt1b phosphate cytidylyltransferase 1, choline, beta isoform 7.6933 0.0000
3 ENSMUSG00000067610 Klri1 killer cell lectin-like receptor family I member 1 7.5078 0.0000
4 ENSMUSG00000020706 Ftsj3 FtsJ RNA methyltransferase homolog 3 (E. coli) 7.4527 0.0000
5 ENSMUSG00000030720 Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) 7.2527 0.0000
6 ENSMUSG00000098540 Mir7059 microRNA 7059 7.2527 0.0000
7 ENSMUSG00000078280 Tas2r122 taste receptor, type 2, member 122 7.1699 0.0000
8 ENSMUSG00000079626 Rhox7b reproductive homeobox 7B 7.1466 0.0000
9 ENSMUSG00000085839 Gm15949 predicted gene 15949 7.0589 0.0000
10 ENSMUSG00000070461 9230112E08Rik RIKEN cDNA 9230112E08 gene 7.0423 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000022517 Mgrn1 mahogunin, ring finger 1 -6.1783 0.0000
50853 ENSMUSG00000097689 4930471D02Rik RIKEN cDNA 4930471D02 gene -6.1755 0.0000
50852 ENSMUSG00000021820 Camk2g calcium/calmodulin-dependent protein kinase II gamma -6.1723 0.0000
50851 ENSMUSG00000049764 Zfp280b zinc finger protein 280B -6.1699 0.0041
50850 ENSMUSG00000042202 Slc35e2 solute carrier family 35, member E2 -6.1661 0.0000
50849 ENSMUSG00000028874 Fgr FGR proto-oncogene, Src family tyrosine kinase -6.1657 0.0000
50848 ENSMUSG00000020354 Sgcd sarcoglycan, delta (dystrophin-associated glycoprotein) -6.1647 0.0000
50847 ENSMUSG00000068601 Gm10244 predicted gene 10244 -6.1617 0.0000
50846 ENSMUSG00000064900 Gm25402 predicted gene, 25402 -6.1617 0.0000
50845 ENSMUSG00000029922 Mkrn1 makorin, ring finger protein, 1 -6.1617 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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