Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147587

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147587


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7020001000000000000000-715Sequence Read ArchiveSRP023116SRP023116_M8Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000048188 Gm8181 predicted gene 8181 7.7944 0.0000
2 ENSMUSG00000035246 Pcyt1b phosphate cytidylyltransferase 1, choline, beta isoform 7.6933 0.0000
3 ENSMUSG00000067610 Klri1 killer cell lectin-like receptor family I member 1 7.5078 0.0000
4 ENSMUSG00000020706 Ftsj3 FtsJ RNA methyltransferase homolog 3 (E. coli) 7.4527 0.0000
5 ENSMUSG00000030720 Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) 7.2527 0.0000
6 ENSMUSG00000098540 Mir7059 microRNA 7059 7.2527 0.0000
7 ENSMUSG00000078280 Tas2r122 taste receptor, type 2, member 122 7.1699 0.0000
8 ENSMUSG00000079626 Rhox7b reproductive homeobox 7B 7.1466 0.0000
9 ENSMUSG00000085839 Gm15949 predicted gene 15949 7.0589 0.0000
10 ENSMUSG00000070461 9230112E08Rik RIKEN cDNA 9230112E08 gene 7.0423 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000014959 Gorasp2 golgi reassembly stacking protein 2 -3.5850 0.0000
47080 ENSMUSG00000014355 Anapc1 anaphase promoting complex subunit 1 -3.5850 0.6155
47079 ENSMUSG00000002825 Qtrt1 queuine tRNA-ribosyltransferase catalytic subunit 1 -3.5850 0.0004
47078 ENSMUSG00000035596 Mboat7 membrane bound O-acyltransferase domain containing 7 -3.5847 0.0000
47077 ENSMUSG00000059852 Kcng2 potassium voltage-gated channel, subfamily G, member 2 -3.5845 0.0000
47076 ENSMUSG00000010797 Wnt2 wingless-type MMTV integration site family, member 2 -3.5842 0.2689
47075 ENSMUSG00000106927 Gm43598 predicted gene 43598 -3.5841 0.0000
47074 ENSMUSG00000041132 N4bp2l1 NEDD4 binding protein 2-like 1 -3.5841 0.0000
47073 ENSMUSG00000024941 Scyl1 SCY1-like 1 (S. cerevisiae) -3.5826 0.0000
47072 ENSMUSG00000086340 1810059C17Rik RIKEN cDNA 1810059C17 gene -3.5823 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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