SHOGoiN Cell Methylome: GSM1147587
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147587 Profile download | 7020001000000000000000-715 | Sequence Read Archive | SRP023116 | SRP023116_M8 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Embryonic stem cell | Mouse | Early embryonic tissue | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000048188 | Gm8181 | predicted gene 8181 | 7.7944 | 0.0000 |
| 2 | ENSMUSG00000035246 | Pcyt1b | phosphate cytidylyltransferase 1, choline, beta isoform | 7.6933 | 0.0000 |
| 3 | ENSMUSG00000067610 | Klri1 | killer cell lectin-like receptor family I member 1 | 7.5078 | 0.0000 |
| 4 | ENSMUSG00000020706 | Ftsj3 | FtsJ RNA methyltransferase homolog 3 (E. coli) | 7.4527 | 0.0000 |
| 5 | ENSMUSG00000030720 | Cln3 | ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) | 7.2527 | 0.0000 |
| 6 | ENSMUSG00000098540 | Mir7059 | microRNA 7059 | 7.2527 | 0.0000 |
| 7 | ENSMUSG00000078280 | Tas2r122 | taste receptor, type 2, member 122 | 7.1699 | 0.0000 |
| 8 | ENSMUSG00000079626 | Rhox7b | reproductive homeobox 7B | 7.1466 | 0.0000 |
| 9 | ENSMUSG00000085839 | Gm15949 | predicted gene 15949 | 7.0589 | 0.0000 |
| 10 | ENSMUSG00000070461 | 9230112E08Rik | RIKEN cDNA 9230112E08 gene | 7.0423 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000022517 | Mgrn1 | mahogunin, ring finger 1 | -6.1783 | 0.0000 |
| 50853 | ENSMUSG00000097689 | 4930471D02Rik | RIKEN cDNA 4930471D02 gene | -6.1755 | 0.0000 |
| 50852 | ENSMUSG00000021820 | Camk2g | calcium/calmodulin-dependent protein kinase II gamma | -6.1723 | 0.0000 |
| 50851 | ENSMUSG00000049764 | Zfp280b | zinc finger protein 280B | -6.1699 | 0.0041 |
| 50850 | ENSMUSG00000042202 | Slc35e2 | solute carrier family 35, member E2 | -6.1661 | 0.0000 |
| 50849 | ENSMUSG00000028874 | Fgr | FGR proto-oncogene, Src family tyrosine kinase | -6.1657 | 0.0000 |
| 50848 | ENSMUSG00000020354 | Sgcd | sarcoglycan, delta (dystrophin-associated glycoprotein) | -6.1647 | 0.0000 |
| 50847 | ENSMUSG00000068601 | Gm10244 | predicted gene 10244 | -6.1617 | 0.0000 |
| 50846 | ENSMUSG00000064900 | Gm25402 | predicted gene, 25402 | -6.1617 | 0.0000 |
| 50845 | ENSMUSG00000029922 | Mkrn1 | makorin, ring finger protein, 1 | -6.1617 | 0.0000 |
