Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147592

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1147592 Profile download	5030203000000000000000-761	Sequence Read Archive	SRP023116	SRP023116_M9	Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing	Methylome	Metaphase II oocyte	Mouse	Genitalia	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000074378	Bsph1	binder of sperm protein homolog 1	8.4890	0.0000
3	ENSMUSG00000110548	Gm45721	predicted gene 45721	7.5546	0.0000
4	ENSMUSG00000004667	Polr2e	polymerase (RNA) II (DNA directed) polypeptide E	7.5328	0.0000
5	ENSMUSG00000103920	Gm37897	predicted gene, 37897	7.5157	0.0000
6	ENSMUSG00000053399	Adamts18	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	7.4468	0.0000
7	ENSMUSG00000109501	Gm14377	predicted gene 14377	7.3923	0.0000
8	ENSMUSG00000110471	Gm45823	predicted gene 45823	7.3576	0.0000
9	ENSMUSG00000111539	Gm48372	predicted gene, 48372	7.3106	0.0000
10	ENSMUSG00000047654	Tssk6	testis-specific serine kinase 6	7.3083	0.0000
47072	ENSMUSG00000089214	Mir1931	microRNA 1931	-4.1699	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000112296	Gm47768	predicted gene, 47768	-4.1699	0.0446
47080	ENSMUSG00000111192	Gm47128	predicted gene, 47128	-4.1699	0.4079
47079	ENSMUSG00000106518	Gm42759	predicted gene 42759	-4.1699	0.0000
47078	ENSMUSG00000105112	Gm42778	predicted gene 42778	-4.1699	0.0000
47077	ENSMUSG00000104707	Gm43649	predicted gene 43649	-4.1699	0.0446
47076	ENSMUSG00000103553	Gm38218	predicted gene, 38218	-4.1699	0.0000
47075	ENSMUSG00000102276	2900069G24Rik	RIKEN cDNA 2900069G24 gene	-4.1699	0.0086
47074	ENSMUSG00000099375	Gm28187	predicted gene 28187	-4.1699	0.0086
47072	ENSMUSG00000089214	Mir1931	microRNA 1931	-4.1699	0.0000
10	ENSMUSG00000047654	Tssk6	testis-specific serine kinase 6	7.3083	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

Now loading...