SHOGoiN Cell Methylome: GSM1147592

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147592


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5030203000000000000000-761Sequence Read ArchiveSRP023116SRP023116_M9Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMetaphase II oocyteMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000074378 Bsph1 binder of sperm protein homolog 1 8.4890 0.0000
3 ENSMUSG00000110548 Gm45721 predicted gene 45721 7.5546 0.0000
4 ENSMUSG00000004667 Polr2e polymerase (RNA) II (DNA directed) polypeptide E 7.5328 0.0000
5 ENSMUSG00000103920 Gm37897 predicted gene, 37897 7.5157 0.0000
6 ENSMUSG00000053399 Adamts18 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 7.4468 0.0000
7 ENSMUSG00000109501 Gm14377 predicted gene 14377 7.3923 0.0000
8 ENSMUSG00000110471 Gm45823 predicted gene 45823 7.3576 0.0000
9 ENSMUSG00000111539 Gm48372 predicted gene, 48372 7.3106 0.0000
10 ENSMUSG00000047654 Tssk6 testis-specific serine kinase 6 7.3083 0.0000
50845 ENSMUSG00000073486 Gm10518 predicted gene 10518 -6.7018 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000049321 Zfp2 zinc finger protein 2 -6.7249 0.0000
50853 ENSMUSG00000019923 Zwint ZW10 interactor -6.7245 0.0000
50852 ENSMUSG00000025162 Csnk1d casein kinase 1, delta -6.7239 0.0000
50851 ENSMUSG00000106550 Gm43646 predicted gene 43646 -6.7161 0.0000
50850 ENSMUSG00000088046 Gm23324 predicted gene, 23324 -6.7142 0.0000
50849 ENSMUSG00000028678 Kif2c kinesin family member 2C -6.7099 0.0000
50848 ENSMUSG00000019969 Psen1 presenilin 1 -6.7078 0.0000
50847 ENSMUSG00000070489 4930527J03Rik RIKEN cDNA 4930527J03 gene -6.7056 0.0000
50846 ENSMUSG00000098751 Mir7672 microRNA 7672 -6.7050 0.0000
50845 ENSMUSG00000073486 Gm10518 predicted gene 10518 -6.7018 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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