Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147592

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147592


Profile download
5030203000000000000000-761Sequence Read ArchiveSRP023116SRP023116_M9Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMetaphase II oocyteMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000074378 Bsph1 binder of sperm protein homolog 1 8.4890 0.0000
3 ENSMUSG00000110548 Gm45721 predicted gene 45721 7.5546 0.0000
4 ENSMUSG00000004667 Polr2e polymerase (RNA) II (DNA directed) polypeptide E 7.5328 0.0000
5 ENSMUSG00000103920 Gm37897 predicted gene, 37897 7.5157 0.0000
6 ENSMUSG00000053399 Adamts18 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18 7.4468 0.0000
7 ENSMUSG00000109501 Gm14377 predicted gene 14377 7.3923 0.0000
8 ENSMUSG00000110471 Gm45823 predicted gene 45823 7.3576 0.0000
9 ENSMUSG00000111539 Gm48372 predicted gene, 48372 7.3106 0.0000
10 ENSMUSG00000047654 Tssk6 testis-specific serine kinase 6 7.3083 0.0000
47072 ENSMUSG00000089214 Mir1931 microRNA 1931 -4.1699 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000112296 Gm47768 predicted gene, 47768 -4.1699 0.0446
47080 ENSMUSG00000111192 Gm47128 predicted gene, 47128 -4.1699 0.4079
47079 ENSMUSG00000106518 Gm42759 predicted gene 42759 -4.1699 0.0000
47078 ENSMUSG00000105112 Gm42778 predicted gene 42778 -4.1699 0.0000
47077 ENSMUSG00000104707 Gm43649 predicted gene 43649 -4.1699 0.0446
47076 ENSMUSG00000103553 Gm38218 predicted gene, 38218 -4.1699 0.0000
47075 ENSMUSG00000102276 2900069G24Rik RIKEN cDNA 2900069G24 gene -4.1699 0.0086
47074 ENSMUSG00000099375 Gm28187 predicted gene 28187 -4.1699 0.0086
47072 ENSMUSG00000089214 Mir1931 microRNA 1931 -4.1699 0.0000
10 ENSMUSG00000047654 Tssk6 testis-specific serine kinase 6 7.3083 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...