SHOGoiN Cell Methylome: GSM1147593

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147593


Profile download
5030203000000000000000-761Sequence Read ArchiveSRP023116SRP023116_M10Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMetaphase II oocyteMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000055670 Zzef1 zinc finger, ZZ-type with EF hand domain 1 7.9744 0.0000
2 ENSMUSG00000022031 Elp3 elongator acetyltransferase complex subunit 3 7.9687 0.0000
3 ENSMUSG00000057454 Lypd3 Ly6/Plaur domain containing 3 7.9009 0.0000
4 ENSMUSG00000102862 Gm37640 predicted gene, 37640 7.9009 0.0000
5 ENSMUSG00000061065 H2al1o H2A histone family member L1O 7.8642 0.0000
6 ENSMUSG00000098212 Gm38706 predicted gene, 38706 7.7611 0.0000
7 ENSMUSG00000085376 Gm14508 predicted gene 14508 7.7376 0.0000
8 ENSMUSG00000038751 Ptk6 PTK6 protein tyrosine kinase 6 7.7108 0.0000
9 ENSMUSG00000028671 Gale galactose-4-epimerase, UDP 7.7107 0.0000
10 ENSMUSG00000065523 Mir192 microRNA 192 7.6962 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000027002 Nckap1 NCK-associated protein 1 -6.8313 0.0000
50853 ENSMUSG00000084969 Gm11205 predicted gene 11205 -6.8266 0.0000
50852 ENSMUSG00000065395 Mir193a microRNA 193a -6.8266 0.0000
50851 ENSMUSG00000025017 Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 -6.8216 0.0000
50850 ENSMUSG00000033632 AW554918 expressed sequence AW554918 -6.8181 0.0000
50849 ENSMUSG00000024269 Tpgs2 tubulin polyglutamylase complex subunit 2 -6.8181 0.0000
50848 ENSMUSG00000029387 Gtf2h3 general transcription factor IIH, polypeptide 3 -6.8148 0.0000
50847 ENSMUSG00000055407 Map6 microtubule-associated protein 6 -6.8138 0.0000
50846 ENSMUSG00000045232 Rln3 relaxin 3 -6.8137 0.0000
50845 ENSMUSG00000005465 Il27ra interleukin 27 receptor, alpha -6.8137 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...