SHOGoiN Cell Methylome: GSM1147596
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147596 Profile download | 5090101000001000000000-236 | Sequence Read Archive | SRP023116 | SRP023116_M13 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Sperm | Mouse | Genitalia | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000011118 | Panx3 | pannexin 3 | 8.2877 | 0.0000 |
| 2 | ENSMUSG00000082312 | Gm11996 | predicted gene 11996 | 8.0980 | 0.0000 |
| 3 | ENSMUSG00000028069 | Gpatch4 | G patch domain containing 4 | 8.0112 | 0.0000 |
| 4 | ENSMUSG00000107931 | Gm44475 | predicted gene, 44475 | 7.9188 | 0.0000 |
| 5 | ENSMUSG00000096941 | Gm26720 | predicted gene, 26720 | 7.8948 | 0.0000 |
| 6 | ENSMUSG00000071151 | Gm4799 | predicted gene 4799 | 7.8455 | 0.0000 |
| 7 | ENSMUSG00000070972 | Dnajc25 | DnaJ heat shock protein family (Hsp40) member C25 | 7.7682 | 0.0000 |
| 8 | ENSMUSG00000092345 | Gm20503 | predicted gene 20503 | 7.7682 | 0.0000 |
| 9 | ENSMUSG00000038044 | Cct8l1 | chaperonin containing TCP1, subunit 8 (theta)-like 1 | 7.7616 | 0.0000 |
| 10 | ENSMUSG00000037400 | Atp11b | ATPase, class VI, type 11B | 7.7415 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000038225 | Primpol | primase and polymerase (DNA-directed) | -6.8183 | 0.0000 |
| 50853 | ENSMUSG00000051223 | Bzw1 | basic leucine zipper and W2 domains 1 | -6.8162 | 0.0000 |
| 50852 | ENSMUSG00000044548 | Dact1 | dishevelled-binding antagonist of beta-catenin 1 | -6.8160 | 0.0000 |
| 50851 | ENSMUSG00000019590 | Cyb561 | cytochrome b-561 | -6.8113 | 0.0000 |
| 50850 | ENSMUSG00000066829 | Zfp810 | zinc finger protein 810 | -6.8110 | 0.0000 |
| 50849 | ENSMUSG00000038949 | Cnst | consortin, connexin sorting protein | -6.8090 | 0.0000 |
| 50848 | ENSMUSG00000041491 | Cep78 | centrosomal protein 78 | -6.8081 | 0.0000 |
| 50847 | ENSMUSG00000103562 | 2810405F15Rik | RIKEN cDNA 2810405F15 gene | -6.8077 | 0.0000 |
| 50846 | ENSMUSG00000058807 | Olfr331 | olfactory receptor 331 | -6.8074 | 0.0000 |
| 50845 | ENSMUSG00000046756 | Mrps7 | mitchondrial ribosomal protein S7 | -6.8071 | 0.0000 |
