SHOGoiN Cell Methylome: GSM1147596

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147596


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5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M13Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000011118 Panx3 pannexin 3 8.2877 0.0000
2 ENSMUSG00000082312 Gm11996 predicted gene 11996 8.0980 0.0000
3 ENSMUSG00000028069 Gpatch4 G patch domain containing 4 8.0112 0.0000
4 ENSMUSG00000107931 Gm44475 predicted gene, 44475 7.9188 0.0000
5 ENSMUSG00000096941 Gm26720 predicted gene, 26720 7.8948 0.0000
6 ENSMUSG00000071151 Gm4799 predicted gene 4799 7.8455 0.0000
7 ENSMUSG00000070972 Dnajc25 DnaJ heat shock protein family (Hsp40) member C25 7.7682 0.0000
8 ENSMUSG00000092345 Gm20503 predicted gene 20503 7.7682 0.0000
9 ENSMUSG00000038044 Cct8l1 chaperonin containing TCP1, subunit 8 (theta)-like 1 7.7616 0.0000
10 ENSMUSG00000037400 Atp11b ATPase, class VI, type 11B 7.7415 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000038225 Primpol primase and polymerase (DNA-directed) -6.8183 0.0000
50853 ENSMUSG00000051223 Bzw1 basic leucine zipper and W2 domains 1 -6.8162 0.0000
50852 ENSMUSG00000044548 Dact1 dishevelled-binding antagonist of beta-catenin 1 -6.8160 0.0000
50851 ENSMUSG00000019590 Cyb561 cytochrome b-561 -6.8113 0.0000
50850 ENSMUSG00000066829 Zfp810 zinc finger protein 810 -6.8110 0.0000
50849 ENSMUSG00000038949 Cnst consortin, connexin sorting protein -6.8090 0.0000
50848 ENSMUSG00000041491 Cep78 centrosomal protein 78 -6.8081 0.0000
50847 ENSMUSG00000103562 2810405F15Rik RIKEN cDNA 2810405F15 gene -6.8077 0.0000
50846 ENSMUSG00000058807 Olfr331 olfactory receptor 331 -6.8074 0.0000
50845 ENSMUSG00000046756 Mrps7 mitchondrial ribosomal protein S7 -6.8071 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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