Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147598

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147598


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5090101000001000000000-236Sequence Read ArchiveSRP023116SRP023116_M15Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeSpermMouseGenitaliaBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000091336 Gm17157 predicted gene 17157 8.0334 0.0000
2 ENSMUSG00000095762 Gm16378 predicted gene 16378 7.3436 0.0000
3 ENSMUSG00000110525 Gm45893 predicted gene 45893 7.3399 0.0000
5 ENSMUSG00000096753 Fam181a family with sequence similarity 181, member A 7.1497 0.0000
6 ENSMUSG00000100789 Gm29508 predicted gene 29508 7.1497 0.0000
7 ENSMUSG00000045267 Tas2r119 taste receptor, type 2, member 119 6.8703 0.0000
8 ENSMUSG00000005763 Cd247 CD247 antigen 6.7944 0.0000
9 ENSMUSG00000104801 Gm43834 predicted gene 43834 6.7631 0.0000
47072 ENSMUSG00000063714 Sp3os trans-acting transcription factor 3, opposite strand -3.6474 0.0000
47073 ENSMUSG00000079286 Gm11084 predicted gene 11084 -3.6474 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000020185 E2f7 E2F transcription factor 7 -3.6500 0.0018
47080 ENSMUSG00000004637 Wwox WW domain-containing oxidoreductase -3.6489 0.0000
47079 ENSMUSG00000043456 Zfp536 zinc finger protein 536 -3.6487 0.0000
47078 ENSMUSG00000020923 Ubtf upstream binding transcription factor, RNA polymerase I -3.6484 0.0000
47077 ENSMUSG00000078552 Dcdc2b doublecortin domain containing 2b -3.6481 0.0000
47076 ENSMUSG00000028797 Tmem234 transmembrane protein 234 -3.6481 0.0000
47075 ENSMUSG00000097029 Gm26560 predicted gene, 26560 -3.6476 0.0017
47074 ENSMUSG00000062604 Srpk2 serine/arginine-rich protein specific kinase 2 -3.6475 0.0048
47073 ENSMUSG00000079286 Gm11084 predicted gene 11084 -3.6474 0.0000
47072 ENSMUSG00000063714 Sp3os trans-acting transcription factor 3, opposite strand -3.6474 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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