SHOGoiN Cell Methylome: GSM1147602

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147602


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M19Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeFemale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000098281 Gm27529 predicted gene, 27529 10.3725 0.0000
2 ENSMUSG00000098276 Mir6358 microRNA 6358 9.2372 0.0000
3 ENSMUSG00000098284 A330093E20Rik RIKEN cDNA A330093E20 gene 9.1997 0.0000
4 ENSMUSG00000047369 Dnah14 dynein, axonemal, heavy chain 14 9.0112 0.0000
5 ENSMUSG00000090658 Prss47 protease, serine 47 8.9099 0.0000
6 ENSMUSG00000066771 Gm5614 predicted gene 5614 8.9089 0.0000
7 ENSMUSG00000076128 Mir686 microRNA 686 8.7842 0.0000
8 ENSMUSG00000109218 Gm44872 predicted gene 44872 8.7020 0.0000
9 ENSMUSG00000049728 Zfp668 zinc finger protein 668 8.6841 0.0000
10 ENSMUSG00000049739 Zfp646 zinc finger protein 646 8.6841 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000004508 Gab2 growth factor receptor bound protein 2-associated protein 2 -7.8478 0.0000
50853 ENSMUSG00000097036 1110036E04Rik RIKEN cDNA 1110036E04 gene -7.8455 0.0000
50852 ENSMUSG00000088988 Gm25606 predicted gene, 25606 -7.8455 0.0000
50851 ENSMUSG00000053861 Gm9925 predicted gene 9925 -7.8446 0.0000
50850 ENSMUSG00000024558 Mapk4 mitogen-activated protein kinase 4 -7.8446 0.0000
50849 ENSMUSG00000048483 Zdhhc22 zinc finger, DHHC-type containing 22 -7.8418 0.0000
50848 ENSMUSG00000029681 Bcl7b B cell CLL/lymphoma 7B -7.8415 0.0000
50847 ENSMUSG00000059201 Lep leptin -7.8388 0.0000
50846 ENSMUSG00000102852 Gm37083 predicted gene, 37083 -7.8382 0.0000
50845 ENSMUSG00000026721 Rabgap1l RAB GTPase activating protein 1-like -7.8382 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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