SHOGoiN Cell Methylome: GSM1147602
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147602 Profile download | 7010000000000000000000-769 | Sequence Read Archive | SRP023116 | SRP023116_M19 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Female pronucleus (Zygote) | Mouse | Early embryonic tissue | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000098281 | Gm27529 | predicted gene, 27529 | 10.3725 | 0.0000 |
| 2 | ENSMUSG00000098276 | Mir6358 | microRNA 6358 | 9.2372 | 0.0000 |
| 3 | ENSMUSG00000098284 | A330093E20Rik | RIKEN cDNA A330093E20 gene | 9.1997 | 0.0000 |
| 4 | ENSMUSG00000047369 | Dnah14 | dynein, axonemal, heavy chain 14 | 9.0112 | 0.0000 |
| 5 | ENSMUSG00000090658 | Prss47 | protease, serine 47 | 8.9099 | 0.0000 |
| 6 | ENSMUSG00000066771 | Gm5614 | predicted gene 5614 | 8.9089 | 0.0000 |
| 7 | ENSMUSG00000076128 | Mir686 | microRNA 686 | 8.7842 | 0.0000 |
| 8 | ENSMUSG00000109218 | Gm44872 | predicted gene 44872 | 8.7020 | 0.0000 |
| 9 | ENSMUSG00000049728 | Zfp668 | zinc finger protein 668 | 8.6841 | 0.0000 |
| 10 | ENSMUSG00000049739 | Zfp646 | zinc finger protein 646 | 8.6841 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000004508 | Gab2 | growth factor receptor bound protein 2-associated protein 2 | -7.8478 | 0.0000 |
| 50853 | ENSMUSG00000097036 | 1110036E04Rik | RIKEN cDNA 1110036E04 gene | -7.8455 | 0.0000 |
| 50852 | ENSMUSG00000088988 | Gm25606 | predicted gene, 25606 | -7.8455 | 0.0000 |
| 50851 | ENSMUSG00000053861 | Gm9925 | predicted gene 9925 | -7.8446 | 0.0000 |
| 50850 | ENSMUSG00000024558 | Mapk4 | mitogen-activated protein kinase 4 | -7.8446 | 0.0000 |
| 50849 | ENSMUSG00000048483 | Zdhhc22 | zinc finger, DHHC-type containing 22 | -7.8418 | 0.0000 |
| 50848 | ENSMUSG00000029681 | Bcl7b | B cell CLL/lymphoma 7B | -7.8415 | 0.0000 |
| 50847 | ENSMUSG00000059201 | Lep | leptin | -7.8388 | 0.0000 |
| 50846 | ENSMUSG00000102852 | Gm37083 | predicted gene, 37083 | -7.8382 | 0.0000 |
| 50845 | ENSMUSG00000026721 | Rabgap1l | RAB GTPase activating protein 1-like | -7.8382 | 0.0000 |
