Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147603

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1147603 Profile download	7010000000000000000000-769	Sequence Read Archive	SRP023116	SRP023116_M20	Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing	Methylome	Male pronucleus (Zygote)	Mouse	Early embryonic tissue	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000104610	Gm567	predicted gene 567	5.4460	0.0000
2	ENSMUSG00000025461	Scart1	scavenger receptor family member expressed on T cells 1	5.1699	0.0000
3	ENSMUSG00000045318	Adra2c	adrenergic receptor, alpha 2c	5.1699	0.0000
4	ENSMUSG00000028093	Acp6	acid phosphatase 6, lysophosphatidic	5.1153	0.0000
5	ENSMUSG00000091336	Gm17157	predicted gene 17157	5.0530	0.0000
6	ENSMUSG00000001120	Pcbp3	poly(rC) binding protein 3	5.0444	0.0000
7	ENSMUSG00000103930	Gm36961	predicted gene, 36961	5.0444	0.0000
8	ENSMUSG00000036040	Adamtsl2	ADAMTS-like 2	5.0000	0.0000
9	ENSMUSG00000098881	Mir6927	microRNA 6927	5.0000	0.0000
10	ENSMUSG00000033294	Noc4l	NOC4 like	4.9542	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000020653	Klf11	Kruppel-like factor 11	-2.7635	0.0000
47080	ENSMUSG00000099071	Mir8095	microRNA 8095	-2.7629	0.2656
47079	ENSMUSG00000086877	A230072C01Rik	RIKEN cDNA A230072C01 gene	-2.7629	0.2656
47078	ENSMUSG00000026782	Abi2	abl interactor 2	-2.7626	0.0000
47077	ENSMUSG00000002222	Rmnd5a	required for meiotic nuclear division 5 homolog A	-2.7618	0.0000
47076	ENSMUSG00000045193	Cirbp	cold inducible RNA binding protein	-2.7613	0.0118
47075	ENSMUSG00000046417	Lrrc75a	leucine rich repeat containing 75A	-2.7612	0.0000
47074	ENSMUSG00000029711	Epo	erythropoietin	-2.7610	0.0002
47073	ENSMUSG00000107859	Gm30731	predicted gene, 30731	-2.7604	0.0004
47072	ENSMUSG00000061613	U2af1	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1	-2.7593	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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