SHOGoiN Cell Methylome: GSM1147603

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147603


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M20Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000104610 Gm567 predicted gene 567 5.4460 0.0000
2 ENSMUSG00000025461 Cd163l1 CD163 molecule-like 1 5.1699 0.0000
3 ENSMUSG00000045318 Adra2c adrenergic receptor, alpha 2c 5.1699 0.0000
4 ENSMUSG00000028093 Acp6 acid phosphatase 6, lysophosphatidic 5.1153 0.0000
5 ENSMUSG00000091336 Gm17157 predicted gene 17157 5.0530 0.0000
6 ENSMUSG00000001120 Pcbp3 poly(rC) binding protein 3 5.0444 0.0000
7 ENSMUSG00000103930 Gm36961 predicted gene, 36961 5.0444 0.0000
8 ENSMUSG00000036040 Adamtsl2 ADAMTS-like 2 5.0000 0.0000
9 ENSMUSG00000098881 Mir6927 microRNA 6927 5.0000 0.0000
10 ENSMUSG00000033294 Noc4l NOC4 like 4.9542 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000030189 Ybx3 Y box protein 3 -4.9939 0.0000
50853 ENSMUSG00000100747 1700084E18Rik RIKEN cDNA 1700084E18 gene -4.9932 0.0000
50852 ENSMUSG00000099041 Gm28035 predicted gene, 28035 -4.9932 0.0000
50851 ENSMUSG00000051224 Tceanc transcription elongation factor A (SII) N-terminal and central domain containing -4.9924 0.0000
50850 ENSMUSG00000038497 Tmco3 transmembrane and coiled-coil domains 3 -4.9924 0.0000
50849 ENSMUSG00000016664 Pacsin2 protein kinase C and casein kinase substrate in neurons 2 -4.9858 0.0000
50848 ENSMUSG00000020074 Ccar1 cell division cycle and apoptosis regulator 1 -4.9841 0.0000
50847 ENSMUSG00000074922 Fam122a family with sequence similarity 122, member A -4.9835 0.0000
50846 ENSMUSG00000030107 Usp18 ubiquitin specific peptidase 18 -4.9815 0.0000
50845 ENSMUSG00000093080 Mir3060 microRNA 3060 -4.9777 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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