Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147603

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147603


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M20Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000104610 Gm567 predicted gene 567 5.4460 0.0000
2 ENSMUSG00000025461 Scart1 scavenger receptor family member expressed on T cells 1 5.1699 0.0000
3 ENSMUSG00000045318 Adra2c adrenergic receptor, alpha 2c 5.1699 0.0000
4 ENSMUSG00000028093 Acp6 acid phosphatase 6, lysophosphatidic 5.1153 0.0000
5 ENSMUSG00000091336 Gm17157 predicted gene 17157 5.0530 0.0000
6 ENSMUSG00000001120 Pcbp3 poly(rC) binding protein 3 5.0444 0.0000
7 ENSMUSG00000103930 Gm36961 predicted gene, 36961 5.0444 0.0000
8 ENSMUSG00000036040 Adamtsl2 ADAMTS-like 2 5.0000 0.0000
9 ENSMUSG00000098881 Mir6927 microRNA 6927 5.0000 0.0000
10 ENSMUSG00000033294 Noc4l NOC4 like 4.9542 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000020653 Klf11 Kruppel-like factor 11 -2.7635 0.0000
47080 ENSMUSG00000099071 Mir8095 microRNA 8095 -2.7629 0.2656
47079 ENSMUSG00000086877 A230072C01Rik RIKEN cDNA A230072C01 gene -2.7629 0.2656
47078 ENSMUSG00000026782 Abi2 abl interactor 2 -2.7626 0.0000
47077 ENSMUSG00000002222 Rmnd5a required for meiotic nuclear division 5 homolog A -2.7618 0.0000
47076 ENSMUSG00000045193 Cirbp cold inducible RNA binding protein -2.7613 0.0118
47075 ENSMUSG00000046417 Lrrc75a leucine rich repeat containing 75A -2.7612 0.0000
47074 ENSMUSG00000029711 Epo erythropoietin -2.7610 0.0002
47073 ENSMUSG00000107859 Gm30731 predicted gene, 30731 -2.7604 0.0004
47072 ENSMUSG00000061613 U2af1 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 -2.7593 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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