Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147605

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1147605 Profile download	7010000000000000000000-769	Sequence Read Archive	SRP023116	SRP023116_M22	Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing	Methylome	Male pronucleus (Zygote)	Mouse	Early embryonic tissue	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000087823	Gm22281	predicted gene, 22281	6.9542	0.0000
2	ENSMUSG00000107728	Gm38910	predicted gene, 38910	6.7279	0.0000
3	ENSMUSG00000109602	Gm31597	predicted gene, 31597	6.6147	0.0000
4	ENSMUSG00000105087	Gm42552	predicted gene 42552	6.5660	0.0000
5	ENSMUSG00000089709	Gm16262	predicted gene 16262	6.4919	0.0000
6	ENSMUSG00000111575	Gm47926	predicted gene, 47926	6.4429	0.0000
7	ENSMUSG00000081605	Gm15953	predicted gene 15953	6.4263	0.0000
8	ENSMUSG00000103435	Gm36992	predicted gene, 36992	6.3038	0.0000
9	ENSMUSG00000104154	Gm38104	predicted gene, 38104	6.3038	0.0000
10	ENSMUSG00000009487	Otog	otogelin	6.0224	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000065606	Mir16-2	microRNA 16-2	-2.1073	0.1158
47080	ENSMUSG00000065580	Mir15b	microRNA 15b	-2.1073	0.1158
47079	ENSMUSG00000028945	Rheb	Ras homolog enriched in brain	-2.1062	0.0000
47078	ENSMUSG00000042680	Garem1	GRB2 associated regulator of MAPK1 subtype 1	-2.1061	0.1346
47077	ENSMUSG00000009927	Rps25	ribosomal protein S25	-2.1052	0.0521
47075	ENSMUSG00000002033	Cd3g	CD3 antigen, gamma polypeptide	-2.1050	0.4447
47074	ENSMUSG00000108695	Siglecl1	Siglec family like 1	-2.1047	0.0236
47072	ENSMUSG00000000568	Hnrnpd	heterogeneous nuclear ribonucleoprotein D	-2.1045	0.0775
10	ENSMUSG00000009487	Otog	otogelin	6.0224	0.0000
9	ENSMUSG00000104154	Gm38104	predicted gene, 38104	6.3038	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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