Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147605

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147605


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M22Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000087823 Gm22281 predicted gene, 22281 6.9542 0.0000
2 ENSMUSG00000107728 Gm38910 predicted gene, 38910 6.7279 0.0000
3 ENSMUSG00000109602 Gm31597 predicted gene, 31597 6.6147 0.0000
4 ENSMUSG00000105087 Gm42552 predicted gene 42552 6.5660 0.0000
5 ENSMUSG00000089709 Gm16262 predicted gene 16262 6.4919 0.0000
6 ENSMUSG00000111575 Gm47926 predicted gene, 47926 6.4429 0.0000
7 ENSMUSG00000081605 Gm15953 predicted gene 15953 6.4263 0.0000
8 ENSMUSG00000103435 Gm36992 predicted gene, 36992 6.3038 0.0000
9 ENSMUSG00000104154 Gm38104 predicted gene, 38104 6.3038 0.0000
10 ENSMUSG00000009487 Otog otogelin 6.0224 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000065606 Mir16-2 microRNA 16-2 -2.1073 0.1158
47080 ENSMUSG00000065580 Mir15b microRNA 15b -2.1073 0.1158
47079 ENSMUSG00000028945 Rheb Ras homolog enriched in brain -2.1062 0.0000
47078 ENSMUSG00000042680 Garem1 GRB2 associated regulator of MAPK1 subtype 1 -2.1061 0.1346
47077 ENSMUSG00000009927 Rps25 ribosomal protein S25 -2.1052 0.0521
47075 ENSMUSG00000002033 Cd3g CD3 antigen, gamma polypeptide -2.1050 0.4447
47074 ENSMUSG00000108695 Siglecl1 Siglec family like 1 -2.1047 0.0236
47072 ENSMUSG00000000568 Hnrnpd heterogeneous nuclear ribonucleoprotein D -2.1045 0.0775
10 ENSMUSG00000009487 Otog otogelin 6.0224 0.0000
9 ENSMUSG00000104154 Gm38104 predicted gene, 38104 6.3038 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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