SHOGoiN Cell Methylome: GSM1147605

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147605


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M22Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000087823 Gm22281 predicted gene, 22281 6.9542 0.0000
2 ENSMUSG00000107728 Gm38910 predicted gene, 38910 6.7279 0.0000
3 ENSMUSG00000109602 Gm31597 predicted gene, 31597 6.6147 0.0000
4 ENSMUSG00000105087 Gm42552 predicted gene 42552 6.5660 0.0000
5 ENSMUSG00000089709 Gm16262 predicted gene 16262 6.4919 0.0000
6 ENSMUSG00000111575 Gm47926 predicted gene, 47926 6.4429 0.0000
7 ENSMUSG00000081605 Gm15953 predicted gene 15953 6.4263 0.0000
8 ENSMUSG00000103435 Gm36992 predicted gene, 36992 6.3038 0.0000
9 ENSMUSG00000104154 Gm38104 predicted gene, 38104 6.3038 0.0000
10 ENSMUSG00000009487 Otog otogelin 6.0224 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000098274 Rpl24 ribosomal protein L24 -5.7567 0.0001
50853 ENSMUSG00000031951 Tmem231 transmembrane protein 231 -5.7565 0.0000
50852 ENSMUSG00000081784 Gm13281 predicted gene 13281 -5.7549 0.0023
50851 ENSMUSG00000063376 Ifna13 interferon alpha 13 -5.7549 0.0023
50850 ENSMUSG00000097146 Gm4211 predicted gene 4211 -5.7534 0.0000
50849 ENSMUSG00000097098 9330111N05Rik RIKEN cDNA 9330111N05 gene -5.7534 0.0000
50848 ENSMUSG00000029502 Golga3 golgi autoantigen, golgin subfamily a, 3 -5.7467 0.0000
50847 ENSMUSG00000027583 Zbtb46 zinc finger and BTB domain containing 46 -5.7463 0.0000
50846 ENSMUSG00000080681 Gm23990 predicted gene, 23990 -5.7449 0.0000
50845 ENSMUSG00000027438 Napb N-ethylmaleimide sensitive fusion protein attachment protein beta -5.7430 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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