SHOGoiN Cell Methylome: GSM1147605
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147605 Profile download | 7010000000000000000000-769 | Sequence Read Archive | SRP023116 | SRP023116_M22 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Male pronucleus (Zygote) | Mouse | Early embryonic tissue | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000087823 | Gm22281 | predicted gene, 22281 | 6.9542 | 0.0000 |
| 2 | ENSMUSG00000107728 | Gm38910 | predicted gene, 38910 | 6.7279 | 0.0000 |
| 3 | ENSMUSG00000109602 | Gm31597 | predicted gene, 31597 | 6.6147 | 0.0000 |
| 4 | ENSMUSG00000105087 | Gm42552 | predicted gene 42552 | 6.5660 | 0.0000 |
| 5 | ENSMUSG00000089709 | Gm16262 | predicted gene 16262 | 6.4919 | 0.0000 |
| 6 | ENSMUSG00000111575 | Gm47926 | predicted gene, 47926 | 6.4429 | 0.0000 |
| 7 | ENSMUSG00000081605 | Gm15953 | predicted gene 15953 | 6.4263 | 0.0000 |
| 8 | ENSMUSG00000103435 | Gm36992 | predicted gene, 36992 | 6.3038 | 0.0000 |
| 9 | ENSMUSG00000104154 | Gm38104 | predicted gene, 38104 | 6.3038 | 0.0000 |
| 10 | ENSMUSG00000009487 | Otog | otogelin | 6.0224 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000098274 | Rpl24 | ribosomal protein L24 | -5.7567 | 0.0001 |
| 50853 | ENSMUSG00000031951 | Tmem231 | transmembrane protein 231 | -5.7565 | 0.0000 |
| 50852 | ENSMUSG00000081784 | Gm13281 | predicted gene 13281 | -5.7549 | 0.0023 |
| 50851 | ENSMUSG00000063376 | Ifna13 | interferon alpha 13 | -5.7549 | 0.0023 |
| 50850 | ENSMUSG00000097146 | Gm4211 | predicted gene 4211 | -5.7534 | 0.0000 |
| 50849 | ENSMUSG00000097098 | 9330111N05Rik | RIKEN cDNA 9330111N05 gene | -5.7534 | 0.0000 |
| 50848 | ENSMUSG00000029502 | Golga3 | golgi autoantigen, golgin subfamily a, 3 | -5.7467 | 0.0000 |
| 50847 | ENSMUSG00000027583 | Zbtb46 | zinc finger and BTB domain containing 46 | -5.7463 | 0.0000 |
| 50846 | ENSMUSG00000080681 | Gm23990 | predicted gene, 23990 | -5.7449 | 0.0000 |
| 50845 | ENSMUSG00000027438 | Napb | N-ethylmaleimide sensitive fusion protein attachment protein beta | -5.7430 | 0.0000 |
