Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1147607

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1147607 Profile download	7010000000000000000000-769	Sequence Read Archive	SRP023116	SRP023116_M24	Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing	Methylome	Male pronucleus (Zygote)	Mouse	Early embryonic tissue	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000092751	Mir3080	microRNA 3080	8.7640	0.0000
2	ENSMUSG00000104967	Gm43436	predicted gene 43436	8.2036	0.0000
3	ENSMUSG00000045267	Tas2r119	taste receptor, type 2, member 119	8.0768	0.0000
4	ENSMUSG00000094202	Mup-ps26	major urinary protein, pseudogene 26	8.0112	0.0000
5	ENSMUSG00000091336	Gm17157	predicted gene 17157	7.8138	0.0000
6	ENSMUSG00000022831	Hcls1	hematopoietic cell specific Lyn substrate 1	7.7437	0.0000
7	ENSMUSG00000024777	Ppp2r5b	protein phosphatase 2, regulatory subunit B', beta	7.7415	0.0000
8	ENSMUSG00000038608	Dock10	dedicator of cytokinesis 10	7.7142	0.0000
9	ENSMUSG00000103192	Gm37645	predicted gene, 37645	7.7142	0.0000
10	ENSMUSG00000089916	Gm16160	predicted gene 16160	7.7074	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000034918	Cdhr2	cadherin-related family member 2	-4.6266	0.0170
47080	ENSMUSG00000022842	Ece2	endothelin converting enzyme 2	-4.6263	0.0000
47079	ENSMUSG00000028121	Bcar3	breast cancer anti-estrogen resistance 3	-4.6257	0.0000
47078	ENSMUSG00000036528	Ppfibp2	PTPRF interacting protein, binding protein 2 (liprin beta 2)	-4.6248	0.0000
47077	ENSMUSG00000030802	Bckdk	branched chain ketoacid dehydrogenase kinase	-4.6245	0.0000
47076	ENSMUSG00000105744	Gm43141	predicted gene 43141	-4.6244	0.0000
47075	ENSMUSG00000035472	Slc25a21	solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21	-4.6234	0.0000
47073	ENSMUSG00000020048	Hsp90b1	heat shock protein 90, beta (Grp94), member 1	-4.6229	0.0000
47072	ENSMUSG00000051615	Rap2a	RAS related protein 2a	-4.6223	0.0000
10	ENSMUSG00000089916	Gm16160	predicted gene 16160	7.7074	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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