SHOGoiN Cell Methylome: GSM1147607
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147607 Profile download | 7010000000000000000000-769 | Sequence Read Archive | SRP023116 | SRP023116_M24 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Male pronucleus (Zygote) | Mouse | Early embryonic tissue | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000092751 | Mir3080 | microRNA 3080 | 8.7640 | 0.0000 |
| 2 | ENSMUSG00000104967 | Gm43436 | predicted gene 43436 | 8.2036 | 0.0000 |
| 3 | ENSMUSG00000045267 | Tas2r119 | taste receptor type 2 member 119 | 8.0768 | 0.0000 |
| 4 | ENSMUSG00000094202 | Mup-ps26 | major urinary protein, pseudogene 26 | 8.0112 | 0.0000 |
| 5 | ENSMUSG00000091336 | Gm17157 | predicted gene 17157 | 7.8138 | 0.0000 |
| 6 | ENSMUSG00000022831 | Hcls1 | Hematopoietic lineage cell-specific protein | 7.7437 | 0.0000 |
| 7 | ENSMUSG00000024777 | Ppp2r5b | protein phosphatase 2, regulatory subunit B', beta | 7.7415 | 0.0000 |
| 8 | ENSMUSG00000038608 | Dock10 | dedicator of cytokinesis 10 | 7.7142 | 0.0000 |
| 9 | ENSMUSG00000103192 | Gm37645 | predicted gene, 37645 | 7.7142 | 0.0000 |
| 10 | ENSMUSG00000089916 | Gm16160 | predicted gene 16160 | 7.7074 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50998 | ENSMUSG00000032046 | Abhd12 | abhydrolase domain containing 12 | -7.4662 | 0.0000 |
| 50997 | ENSMUSG00000060935 | Tmem263 | Transmembrane protein 263 | -7.4621 | 0.0000 |
| 50996 | ENSMUSG00000044164 | Rnf182 | E3 ubiquitin-protein ligase RNF182 | -7.4610 | 0.0000 |
| 50995 | ENSMUSG00000025326 | Ube3a | ubiquitin protein ligase E3A | -7.4594 | 0.0002 |
| 50994 | ENSMUSG00000020105 | Lrig3 | Leucine-rich repeats and immunoglobulin-like domains protein 3 | -7.4565 | 0.0000 |
| 50993 | ENSMUSG00000058897 | Col25a1 | Collagen alpha-1(XXV) chain Collagen-like Alzheimer amyloid plaque component | -7.4512 | 0.0000 |
| 50992 | ENSMUSG00000027439 | Gzf1 | Mus musculus GDNF-inducible zinc finger protein 1 (Gzf1), transcript variant 1, mRNA. | -7.4461 | 0.0000 |
| 50991 | ENSMUSG00000110408 | Gm45881 | predicted gene 45881 | -7.4429 | 0.0002 |
| 50990 | ENSMUSG00000112218 | Gm18726 | predicted gene, 18726 | -7.4400 | 0.0000 |
| 50989 | ENSMUSG00000026018 | Ica1l | Mus musculus islet cell autoantigen 1-like (Ica1l), transcript variant 4, mRNA. | -7.4397 | 0.0000 |
