SHOGoiN Cell Methylome: GSM1147607
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147607 Profile download | 7010000000000000000000-769 | Sequence Read Archive | SRP023116 | SRP023116_M24 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Male pronucleus (Zygote) | Mouse | Early embryonic tissue | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000092751 | Mir3080 | microRNA 3080 | 8.7640 | 0.0000 |
| 2 | ENSMUSG00000104967 | Gm43436 | predicted gene 43436 | 8.2036 | 0.0000 |
| 3 | ENSMUSG00000045267 | Tas2r119 | taste receptor, type 2, member 119 | 8.0768 | 0.0000 |
| 4 | ENSMUSG00000094202 | Mup-ps26 | major urinary protein, pseudogene 26 | 8.0112 | 0.0000 |
| 5 | ENSMUSG00000091336 | Gm17157 | predicted gene 17157 | 7.8138 | 0.0000 |
| 6 | ENSMUSG00000022831 | Hcls1 | hematopoietic cell specific Lyn substrate 1 | 7.7437 | 0.0000 |
| 7 | ENSMUSG00000024777 | Ppp2r5b | protein phosphatase 2, regulatory subunit B', beta | 7.7415 | 0.0000 |
| 8 | ENSMUSG00000038608 | Dock10 | dedicator of cytokinesis 10 | 7.7142 | 0.0000 |
| 9 | ENSMUSG00000103192 | Gm37645 | predicted gene, 37645 | 7.7142 | 0.0000 |
| 10 | ENSMUSG00000089916 | Gm16160 | predicted gene 16160 | 7.7074 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000017421 | Zfp207 | zinc finger protein 207 | -7.1241 | 0.0000 |
| 50853 | ENSMUSG00000039929 | Urb1 | URB1 ribosome biogenesis 1 homolog (S. cerevisiae) | -7.1193 | 0.0000 |
| 50852 | ENSMUSG00000058807 | Olfr331 | olfactory receptor 331 | -7.1189 | 0.0000 |
| 50851 | ENSMUSG00000022295 | Atp6v1c1 | ATPase, H+ transporting, lysosomal V1 subunit C1 | -7.1178 | 0.0000 |
| 50850 | ENSMUSG00000074406 | Zfp628 | zinc finger protein 628 | -7.1164 | 0.0000 |
| 50849 | ENSMUSG00000028329 | Xpa | xeroderma pigmentosum, complementation group A | -7.1146 | 0.0000 |
| 50848 | ENSMUSG00000051864 | Tbc1d22a | TBC1 domain family, member 22a | -7.1137 | 0.0000 |
| 50847 | ENSMUSG00000005583 | Mef2c | myocyte enhancer factor 2C | -7.1129 | 0.0000 |
| 50846 | ENSMUSG00000024575 | Pde6a | phosphodiesterase 6A, cGMP-specific, rod, alpha | -7.1111 | 0.0000 |
| 50845 | ENSMUSG00000040302 | Rbm48 | RNA binding motif protein 48 | -7.1088 | 0.0000 |
