SHOGoiN Cell Methylome: GSM1147607

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147607


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M24Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000092751 Mir3080 microRNA 3080 8.7640 0.0000
2 ENSMUSG00000104967 Gm43436 predicted gene 43436 8.2036 0.0000
3 ENSMUSG00000045267 Tas2r119 taste receptor, type 2, member 119 8.0768 0.0000
4 ENSMUSG00000094202 Mup-ps26 major urinary protein, pseudogene 26 8.0112 0.0000
5 ENSMUSG00000091336 Gm17157 predicted gene 17157 7.8138 0.0000
6 ENSMUSG00000022831 Hcls1 hematopoietic cell specific Lyn substrate 1 7.7437 0.0000
7 ENSMUSG00000024777 Ppp2r5b protein phosphatase 2, regulatory subunit B', beta 7.7415 0.0000
8 ENSMUSG00000038608 Dock10 dedicator of cytokinesis 10 7.7142 0.0000
9 ENSMUSG00000103192 Gm37645 predicted gene, 37645 7.7142 0.0000
10 ENSMUSG00000089916 Gm16160 predicted gene 16160 7.7074 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000017421 Zfp207 zinc finger protein 207 -7.1241 0.0000
50853 ENSMUSG00000039929 Urb1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) -7.1193 0.0000
50852 ENSMUSG00000058807 Olfr331 olfactory receptor 331 -7.1189 0.0000
50851 ENSMUSG00000022295 Atp6v1c1 ATPase, H+ transporting, lysosomal V1 subunit C1 -7.1178 0.0000
50850 ENSMUSG00000074406 Zfp628 zinc finger protein 628 -7.1164 0.0000
50849 ENSMUSG00000028329 Xpa xeroderma pigmentosum, complementation group A -7.1146 0.0000
50848 ENSMUSG00000051864 Tbc1d22a TBC1 domain family, member 22a -7.1137 0.0000
50847 ENSMUSG00000005583 Mef2c myocyte enhancer factor 2C -7.1129 0.0000
50846 ENSMUSG00000024575 Pde6a phosphodiesterase 6A, cGMP-specific, rod, alpha -7.1111 0.0000
50845 ENSMUSG00000040302 Rbm48 RNA binding motif protein 48 -7.1088 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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