SHOGoiN Cell Methylome: GSM1147608
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147608 Profile download | 7010000000000000000000-769 | Sequence Read Archive | SRP023116 | SRP023116_M25 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Female pronucleus (Zygote) | Mouse | Early embryonic tissue | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000098516 | Mir7651 | microRNA 7651 | 7.2798 | 0.0000 |
| 2 | ENSMUSG00000085025 | Gm13715 | predicted gene 13715 | 7.2479 | 0.0000 |
| 3 | ENSMUSG00000010797 | Wnt2 | wingless-type MMTV integration site family, member 2 | 7.1204 | 0.0000 |
| 4 | ENSMUSG00000033955 | Tnks1bp1 | tankyrase 1 binding protein 1 | 7.0625 | 0.0000 |
| 5 | ENSMUSG00000096992 | Gm26788 | predicted gene, 26788 | 7.0381 | 0.0000 |
| 6 | ENSMUSG00000068324 | Gm10029 | predicted gene 10029 | 6.9658 | 0.0000 |
| 7 | ENSMUSG00000067835 | Gm14661 | predicted gene 14661 | 6.9410 | 0.0000 |
| 8 | ENSMUSG00000064558 | Gm24620 | predicted gene, 24620 | 6.8948 | 0.0000 |
| 9 | ENSMUSG00000084052 | Gm11745 | predicted gene 11745 | 6.8291 | 0.0000 |
| 10 | ENSMUSG00000041794 | Myrip | myosin VIIA and Rab interacting protein | 6.5545 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000029168 | Dpysl5 | dihydropyrimidinase-like 5 | -6.2364 | 0.0000 |
| 50853 | ENSMUSG00000110864 | Gm31374 | predicted gene, 31374 | -6.2288 | 0.0000 |
| 50852 | ENSMUSG00000110091 | Gm39115 | predicted gene, 39115 | -6.2288 | 0.0027 |
| 50851 | ENSMUSG00000097463 | 4930448E22Rik | RIKEN cDNA 4930448E22 gene | -6.2288 | 0.0000 |
| 50850 | ENSMUSG00000083245 | Gm11185 | predicted gene 11185 | -6.2288 | 0.0000 |
| 50849 | ENSMUSG00000046096 | Mosmo | modulator of smoothened | -6.2266 | 0.0000 |
| 50848 | ENSMUSG00000034227 | Foxj1 | forkhead box J1 | -6.2240 | 0.0000 |
| 50847 | ENSMUSG00000104512 | Gm37165 | predicted gene, 37165 | -6.2224 | 0.0000 |
| 50846 | ENSMUSG00000103897 | Pcdhga8 | protocadherin gamma subfamily A, 8 | -6.2224 | 0.0000 |
| 50845 | ENSMUSG00000088501 | Gm22788 | predicted gene, 22788 | -6.2095 | 0.0026 |
