SHOGoiN Cell Methylome: GSM1147608
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1147608 Profile download | 7010000000000000000000-769 | Sequence Read Archive | SRP023116 | SRP023116_M25 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Female pronucleus (Zygote) | Mouse | Early embryonic tissue | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000098516 | Mir7651 | microRNA 7651 | 7.2798 | 0.0000 |
| 2 | ENSMUSG00000085025 | Gm13715 | predicted gene 13715 | 7.2479 | 0.0000 |
| 3 | ENSMUSG00000010797 | Wnt2 | wingless-type MMTV integration site family, member 2 | 7.1204 | 0.0000 |
| 4 | ENSMUSG00000033955 | Tnks1bp1 | 182 kDa tankyrase-1-binding protein | 7.0625 | 0.0000 |
| 5 | ENSMUSG00000096992 | Gm26788 | predicted gene, 26788 | 7.0381 | 0.0000 |
| 6 | ENSMUSG00000068324 | Gm10029 | predicted gene 10029 | 6.9658 | 0.0000 |
| 7 | ENSMUSG00000067835 | Gm14661 | predicted gene 14661 | 6.9410 | 0.0000 |
| 8 | ENSMUSG00000064558 | Gm24620 | predicted gene, 24620 | 6.8948 | 0.0000 |
| 9 | ENSMUSG00000084052 | Gm11745 | predicted gene 11745 | 6.8291 | 0.0000 |
| 10 | ENSMUSG00000041794 | Myrip | Rab effector MyRIP | 6.5545 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50998 | ENSMUSG00000097115 | 1810019N24Rik | RIKEN cDNA 1810019N24 gene | -6.5736 | 0.0000 |
| 50997 | ENSMUSG00000039179 | Tekt5 | Tektin-5 | -6.5673 | 0.0000 |
| 50996 | ENSMUSG00000046841 | Ckap4 | Cytoskeleton-associated protein 4 | -6.5654 | 0.0000 |
| 50995 | ENSMUSG00000104148 | Pcdha2 | protocadherin alpha 2 | -6.5604 | 0.0000 |
| 50994 | ENSMUSG00000103386 | Gm37751 | predicted gene, 37751 | -6.5604 | 0.0000 |
| 50993 | ENSMUSG00000029330 | Cds1 | Phosphatidate cytidylyltransferase 1 | -6.5528 | 0.0000 |
| 50992 | ENSMUSG00000111596 | Gm8058 | predicted gene 8058 | -6.5510 | 0.0000 |
| 50991 | ENSMUSG00000045975 | C2cd2 | C2 domain-containing protein 2 | -6.5494 | 0.0000 |
| 50990 | ENSMUSG00000042029 | Ncapg2 | non-SMC condensin II complex, subunit G2 | -6.5476 | 0.0000 |
| 50989 | ENSMUSG00000110239 | Gm45620 | predicted gene 45620 | -6.5442 | 0.0000 |
