SHOGoiN Cell Methylome: GSM1147608

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147608


Profile download
7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M25Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeFemale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000098516 Mir7651 microRNA 7651 7.2798 0.0000
2 ENSMUSG00000085025 Gm13715 predicted gene 13715 7.2479 0.0000
3 ENSMUSG00000010797 Wnt2 wingless-type MMTV integration site family, member 2 7.1204 0.0000
4 ENSMUSG00000033955 Tnks1bp1 tankyrase 1 binding protein 1 7.0625 0.0000
5 ENSMUSG00000096992 Gm26788 predicted gene, 26788 7.0381 0.0000
6 ENSMUSG00000068324 Gm10029 predicted gene 10029 6.9658 0.0000
7 ENSMUSG00000067835 Gm14661 predicted gene 14661 6.9410 0.0000
8 ENSMUSG00000064558 Gm24620 predicted gene, 24620 6.8948 0.0000
9 ENSMUSG00000084052 Gm11745 predicted gene 11745 6.8291 0.0000
10 ENSMUSG00000041794 Myrip myosin VIIA and Rab interacting protein 6.5545 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000029168 Dpysl5 dihydropyrimidinase-like 5 -6.2364 0.0000
50853 ENSMUSG00000110864 Gm31374 predicted gene, 31374 -6.2288 0.0000
50852 ENSMUSG00000110091 Gm39115 predicted gene, 39115 -6.2288 0.0027
50851 ENSMUSG00000097463 4930448E22Rik RIKEN cDNA 4930448E22 gene -6.2288 0.0000
50850 ENSMUSG00000083245 Gm11185 predicted gene 11185 -6.2288 0.0000
50849 ENSMUSG00000046096 Mosmo modulator of smoothened -6.2266 0.0000
50848 ENSMUSG00000034227 Foxj1 forkhead box J1 -6.2240 0.0000
50847 ENSMUSG00000104512 Gm37165 predicted gene, 37165 -6.2224 0.0000
50846 ENSMUSG00000103897 Pcdhga8 protocadherin gamma subfamily A, 8 -6.2224 0.0000
50845 ENSMUSG00000088501 Gm22788 predicted gene, 22788 -6.2095 0.0026

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...